Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AS54_RS22440 | Genome accession | NZ_CP009318 |
| Coordinates | 4135312..4136355 (-) | Length | 347 a.a. |
| NCBI ID | WP_001013200.1 | Uniprot ID | A0AA96SWA8 |
| Organism | Bacillus cereus 03BB102 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4130312..4141355
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AS54_RS22395 (AS54_4293) | - | 4130739..4130939 (-) | 201 | WP_000106084.1 | YqzE family protein | - |
| AS54_RS22400 (AS54_4294) | aroK | 4130978..4131475 (-) | 498 | WP_000836630.1 | shikimate kinase AroK | - |
| AS54_RS22405 (AS54_4295) | - | 4131596..4132246 (-) | 651 | WP_000183879.1 | 2OG-Fe(II) oxygenase | - |
| AS54_RS22410 (AS54_4296) | comGG | 4132422..4132793 (-) | 372 | WP_001231191.1 | competence type IV pilus minor pilin ComGG | - |
| AS54_RS22415 (AS54_4297) | comGF | 4132790..4133260 (-) | 471 | WP_000923088.1 | competence type IV pilus minor pilin ComGF | - |
| AS54_RS22420 (AS54_4298) | comGE | 4133230..4133532 (-) | 303 | WP_000829458.1 | competence type IV pilus minor pilin ComGE | - |
| AS54_RS22425 (AS54_4299) | comGD | 4133525..4133980 (-) | 456 | WP_000810393.1 | comG operon protein ComGD | - |
| AS54_RS22430 (AS54_4300) | comGC | 4133977..4134276 (-) | 300 | WP_001178696.1 | comG operon protein ComGC | - |
| AS54_RS22435 (AS54_4301) | comGB | 4134288..4135319 (-) | 1032 | WP_000471911.1 | comG operon protein ComGB | - |
| AS54_RS22440 (AS54_4302) | comGA | 4135312..4136355 (-) | 1044 | WP_001013200.1 | competence protein ComGA | Machinery gene |
| AS54_RS22445 (AS54_4303) | - | 4136561..4137256 (+) | 696 | WP_000434117.1 | helix-turn-helix transcriptional regulator | - |
| AS54_RS22450 (AS54_4304) | - | 4137382..4137624 (+) | 243 | WP_000440711.1 | DUF2626 domain-containing protein | - |
| AS54_RS22455 (AS54_4305) | - | 4137731..4139125 (+) | 1395 | WP_001094338.1 | L-cystine transporter | - |
| AS54_RS22460 (AS54_4306) | - | 4139342..4139557 (-) | 216 | WP_001008320.1 | DUF3912 family protein | - |
| AS54_RS22465 (AS54_4307) | - | 4139810..4140121 (+) | 312 | WP_001093243.1 | hypothetical protein | - |
| AS54_RS22470 (AS54_4308) | - | 4140158..4140646 (-) | 489 | WP_000764279.1 | hypothetical protein | - |
| AS54_RS22475 (AS54_4309) | - | 4140726..4141100 (-) | 375 | WP_001012350.1 | nucleoside 2-deoxyribosyltransferase | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39412.97 Da Isoelectric Point: 9.2147
>NTDB_id=128494 AS54_RS22440 WP_001013200.1 4135312..4136355(-) (comGA) [Bacillus cereus 03BB102]
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKYCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKYCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=128494 AS54_RS22440 WP_001013200.1 4135312..4136355(-) (comGA) [Bacillus cereus 03BB102]
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAATATTGTATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGTCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
GTTATTCTCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTCGGTTCATGGATTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAATATTGTATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGTCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
GTTATTCTCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTCGGTTCATGGATTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.925 |
100 |
0.579 |
| pilB | Vibrio campbellii strain DS40M4 |
35.977 |
100 |
0.366 |