Detailed information NTG0128181

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: AA105_RS02245
• Genome accession: NZ_CP011419
• Coordinates: 423122..425512 (+)
• Length: 796 a.a.
• NCBI ID: WP_004194151.1
• Uniprot ID: -
• Organism: Streptococcus suis strain NSUI002
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 418122..430512

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AA105_RS02225 (AA105_02230)	-	419443..419925 (-)	483	WP_004194159.1	S-ribosylhomocysteine lyase	-
AA105_RS02230 (AA105_02235)	-	420053..421666 (+)	1614	WP_009909417.1	ribonuclease Y	-
AA105_RS02235 (AA105_02240)	gmk	421814..422440 (+)	627	WP_004194155.1	guanylate kinase	-
AA105_RS02240 (AA105_02245)	rpoZ	422464..422778 (+)	315	WP_004194153.1	DNA-directed RNA polymerase subunit omega	-
AA105_RS02245 (AA105_02250)	priA	423122..425512 (+)	2391	WP_004194151.1	primosomal protein N'	Machinery gene
AA105_RS02250 (AA105_02255)	fmt	425643..426581 (+)	939	WP_009909423.1	methionyl-tRNA formyltransferase	-
AA105_RS02255 (AA105_02260)	rsmB	426568..427881 (+)	1314	WP_074412645.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
AA105_RS02260 (AA105_02265)	-	427919..428656 (+)	738	WP_012774983.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-

Sequence

Protein

• Length: 796 a.a.
• Molecular weight: 90947.83 Da
• Isoelectric Point: 6.1963

>NTDB_id=128181 AA105_RS02245 WP_004194151.1 423122..425512(+) (priA) [Streptococcus suis strain NSUI002]
MLAQIIVDVPLMQTDQAYSYRVPAELEEGLKVGVRVHVPFGKGNRLIQGIVVDLIDEDDENNLQDLKELAEVLDYSPVLN
QEQFWLADQMRKSVFSYKIALLKSMLPSLLNSTYDKLLRPGLGLEMAEQISLFGDKEQIRFSDLDVTEQGKIMRLAQSGK
ILVDYVAKDKKQIKTEKWYRVCLEKLREADISNRAKKRQQLREFLLEHSEDQLLSNLKSAYSADTLRYFQEKGYIEVWEE
EVSRTQGVFDKVEKTQALDLNPEQAIAVREIVASIGQESQTFLLQGVTGSGKTEVYLQVIDRVLKMGKTAIMLVPEISLT
PQMTNRFISRFGQQVAILHSGLSDGEKYDEWRKIEAGNAQVVVGARSAIFAPLTNLGVIIIDEEHEATYKQDSNPRYHAR
DVAKLRADYNRATLVLGSATPSLETRARASRGVYGRLTLNQRANPLARIPEVEVVDFRDYIGQQEASNFTPVLIEKIREK
LARKEQVVLMLNRRGYSSFVMCRDCGSVDQCPNCDISLTLHMDTKTMNCHYCGFQKGIPQTCPNCQSRSIRYYGTGTQKA
YDELQELLPEARILRMDVDTTKKKGAHEDLLERFGRGEADILLGTQMIAKGLDFPNVTLVGVLNADTALNLPDFRSSERT
FQLLTQVAGRAGRADKEGEVLIQTYNPNHYAIAFAKEQDYEGFYRYEMGIRKNLGYPPYYFTVGLTFSHKSEEFVVKKAY
ETVAFLRQHLTDAIQILGPTPKPIARTHNLYHYQIILKYRHEDRLEEVLNQILDWTQERENQDLRLIIDNEPQNMM

Nucleotide

• Length: 2391 bp

>NTDB_id=128181 AA105_RS02245 WP_004194151.1 423122..425512(+) (priA) [Streptococcus suis strain NSUI002]
ATGTTAGCACAGATTATTGTAGACGTCCCTTTGATGCAGACAGATCAAGCTTATTCCTATCGAGTTCCAGCTGAGTTGGA
AGAGGGGCTCAAGGTTGGCGTGCGTGTCCATGTACCCTTTGGTAAGGGAAATCGGCTGATTCAAGGTATTGTAGTTGATT
TGATTGATGAAGATGATGAAAATAACTTACAAGACTTGAAAGAGCTTGCCGAGGTTTTGGACTATAGTCCTGTTCTCAAT
CAAGAGCAATTTTGGTTGGCGGACCAGATGAGAAAGTCGGTCTTCTCCTATAAAATTGCCCTCTTAAAATCCATGTTGCC
TAGCTTGCTCAATTCGACCTATGACAAATTGCTCCGTCCAGGGCTTGGTTTGGAAATGGCAGAGCAGATTAGTCTGTTTG
GTGATAAGGAGCAGATTCGTTTTTCTGACTTGGACGTGACAGAGCAAGGGAAAATCATGCGTCTGGCCCAGTCAGGAAAA
ATCTTGGTAGACTATGTGGCCAAGGATAAGAAGCAAATCAAGACAGAAAAATGGTACCGAGTTTGTCTGGAGAAATTACG
AGAAGCAGACATCAGCAATCGAGCCAAGAAACGGCAGCAGTTAAGGGAATTTCTTCTGGAACACTCGGAAGACCAGCTTC
TTTCAAACCTAAAATCGGCCTATTCAGCTGATACGCTCCGCTATTTCCAAGAAAAAGGCTATATAGAAGTCTGGGAGGAG
GAAGTGTCGCGGACTCAGGGAGTTTTTGATAAGGTGGAAAAAACGCAGGCCTTGGATTTGAATCCAGAGCAGGCGATTGC
GGTTCGTGAGATTGTGGCCTCTATCGGTCAGGAAAGTCAGACATTTCTACTGCAAGGAGTGACAGGTTCTGGGAAGACGG
AAGTCTATCTCCAGGTTATTGATAGGGTCTTGAAAATGGGAAAAACGGCTATTATGCTAGTGCCTGAAATTTCCTTGACC
CCTCAGATGACCAATCGTTTTATTTCTCGTTTTGGCCAGCAGGTTGCCATTTTACACTCGGGCTTGTCTGATGGTGAGAA
GTATGACGAGTGGCGGAAGATTGAGGCGGGGAATGCCCAGGTGGTTGTCGGGGCTCGTTCGGCTATTTTTGCACCATTGA
CAAACTTGGGTGTTATCATCATTGATGAGGAGCATGAGGCGACCTACAAGCAGGACAGCAATCCACGCTACCATGCGCGT
GATGTGGCAAAGTTGCGGGCTGATTATAATCGAGCGACCCTGGTCTTGGGTTCTGCTACGCCGAGTCTTGAAACACGGGC
TCGGGCTAGTCGAGGAGTCTATGGAAGACTGACTCTTAACCAGAGGGCCAATCCCTTGGCTCGTATTCCAGAAGTGGAAG
TTGTGGATTTCCGTGATTATATCGGTCAGCAGGAGGCTAGTAATTTTACCCCTGTTCTGATTGAAAAGATAAGAGAAAAA
TTGGCTCGTAAGGAACAGGTCGTTCTTATGTTGAATAGGCGTGGTTATTCTTCTTTTGTCATGTGTCGTGATTGCGGGAG
TGTTGACCAGTGTCCCAACTGTGATATTTCCCTTACGCTTCACATGGATACAAAAACGATGAATTGCCATTATTGTGGTT
TTCAAAAGGGGATTCCTCAGACCTGTCCAAACTGTCAAAGTCGTTCTATTCGTTATTATGGGACGGGTACGCAAAAGGCC
TACGATGAATTGCAGGAGCTCTTGCCAGAAGCTAGAATTTTGCGTATGGATGTGGATACTACCAAGAAAAAAGGTGCTCA
TGAGGACTTGCTCGAACGGTTTGGTCGAGGCGAAGCGGATATTCTTCTGGGAACTCAGATGATTGCCAAGGGCTTGGATT
TTCCAAATGTGACCCTAGTTGGCGTGCTCAATGCGGATACGGCTCTGAATTTGCCTGATTTTCGGTCTTCTGAGCGGACC
TTCCAGTTGCTAACTCAGGTAGCTGGTCGGGCTGGTCGAGCTGATAAGGAAGGGGAGGTCCTGATTCAGACCTATAACCC
CAATCATTATGCCATTGCTTTTGCCAAAGAGCAGGATTATGAAGGTTTCTATCGTTATGAGATGGGCATTCGGAAAAATC
TTGGTTATCCACCTTACTATTTTACAGTTGGCTTAACCTTTTCGCACAAGTCAGAAGAATTTGTCGTGAAAAAAGCCTAT
GAAACTGTAGCCTTTCTCCGTCAACACTTAACAGATGCAATTCAAATCTTGGGACCGACGCCCAAGCCTATTGCCAGAAC
TCATAATCTCTACCACTACCAGATCATCTTGAAATACCGGCATGAAGACCGTTTGGAAGAGGTATTGAATCAGATTTTGG
ATTGGACACAGGAGAGAGAAAATCAAGATTTGCGACTGATTATTGACAATGAACCGCAGAATATGATGTGA

Domains

Predicted by InterProScan.

• Primosomal protein N C-terminal domain (PriA_C) (698-792)

• Type III restriction enzyme, res subunit (ResIII) (259-422)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (511-536)

• Helicase conserved C-terminal domain (Helicase_C) (570-654)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (4-107)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	47.584	100	0.482