Detailed information NTG0128058

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SpyM6D471_RS08190
• Genome accession: NZ_CP011415
• Coordinates: 1637853..1639121 (+)
• Length: 422 a.a.
• NCBI ID: WP_011185006.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain D471
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1632853..1644121

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SpyM6D471_RS08175 (SpyM6D471_08170)	-	1633306..1635279 (+)	1974	WP_011185004.1	amidase family protein	-
SpyM6D471_RS08180 (SpyM6D471_08175)	pabB	1635464..1637221 (+)	1758	WP_021340621.1	aminodeoxychorismate synthase component I	-
SpyM6D471_RS08185 (SpyM6D471_08180)	-	1637254..1637820 (+)	567	WP_010922701.1	aminodeoxychorismate/anthranilate synthase component II	-
SpyM6D471_RS08190 (SpyM6D471_08185)	rarA	1637853..1639121 (+)	1269	WP_011185006.1	replication-associated recombination protein A	Machinery gene
SpyM6D471_RS08200 (SpyM6D471_08195)	-	1639620..1640060 (+)	441	WP_011018265.1	GNAT family N-acetyltransferase	-
SpyM6D471_RS08205 (SpyM6D471_08200)	-	1640115..1640621 (+)	507	WP_011185008.1	DNA topology modulation protein	-
SpyM6D471_RS08210 (SpyM6D471_08205)	-	1640870..1641571 (+)	702	WP_021340615.1	exotoxin beta-grasp domain-containing protein	-
SpyM6D471_RS08215 (SpyM6D471_08210)	-	1642300..1643928 (+)	1629	WP_047149519.1	ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46655.13 Da
• Isoelectric Point: 6.5105

>NTDB_id=128058 SpyM6D471_RS08190 WP_011185006.1 1637853..1639121(+) (rarA) [Streptococcus pyogenes strain D471]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEITEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTKPDSDGKRHITLDTVENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLSD

Nucleotide

• Length: 1269 bp

>NTDB_id=128058 SpyM6D471_RS08190 WP_011185006.1 1637853..1639121(+) (rarA) [Streptococcus pyogenes strain D471]
ATGCCTGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTACGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGATAAGACAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAATGGCACCATTATCATGATTGGCGCAACCACTGAGAACCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACAAAGCCAGATAGCGATGGGAAGC
GACACATCACCTTAGACACTGTTGAAAATTCCTTGCAGCGCAGCTATATTACCATGGATAAAGATGGCGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCTCCTAAATCAAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTATGCTGGCAGTAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTCAGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	60.192	98.815	0.595