Detailed information NTG0127680

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IX88_RS09700
• Genome accession: NZ_CP009256
• Coordinates: 2072213..2072914 (+)
• Length: 233 a.a.
• NCBI ID: WP_032000520.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain AB31
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2067213..2077914

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IX88_RS09665 (IX88_09805)	kdsB	2067736..2068497 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
IX88_RS09670 (IX88_09810)	-	2068509..2069489 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
IX88_RS09675 (IX88_09815)	-	2069501..2069842 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
IX88_RS09680 (IX88_09820)	-	2069860..2070633 (+)	774	WP_000497298.1	TatD family hydrolase	-
IX88_RS09685 (IX88_09825)	-	2070671..2071279 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IX88_RS09690 (IX88_09830)	-	2071289..2071843 (+)	555	WP_000841373.1	type II secretion system protein	-
IX88_RS09695 (IX88_09835)	xcpV	2071833..2072213 (+)	381	WP_000836907.1	type II secretion system minor pseudopilin GspI	Machinery gene
IX88_RS09700 (IX88_09840)	xcpW	2072213..2072914 (+)	702	WP_032000520.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IX88_RS09705 (IX88_09845)	gspK	2072914..2073873 (+)	960	WP_032000521.1	type II secretion system minor pseudopilin GspK	-
IX88_RS09710 (IX88_09850)	-	2074103..2074699 (+)	597	WP_032000522.1	6-carboxytetrahydropterin synthase	-
IX88_RS09715 (IX88_09855)	ung	2074750..2075463 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
IX88_RS09720 (IX88_09860)	-	2075460..2076584 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
IX88_RS09725 (IX88_09865)	tadA	2076591..2077094 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
IX88_RS09730 (IX88_09870)	-	2077164..2077607 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26601.53 Da
• Isoelectric Point: 9.5501

>NTDB_id=127680 IX88_RS09700 WP_032000520.1 2072213..2072914(+) (xcpW) [Acinetobacter baumannii strain AB31]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEATKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=127680 IX88_RS09700 WP_032000520.1 2072213..2072914(+) (xcpW) [Acinetobacter baumannii strain AB31]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGCCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991