Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | JT17_RS09185 | Genome accession | NZ_CP009237 |
| Coordinates | 1876828..1877169 (+) | Length | 113 a.a. |
| NCBI ID | WP_010786294.1 | Uniprot ID | - |
| Organism | Glaesserella parasuis strain KL0318 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1871828..1882169
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JT17_RS09165 (JT17_09425) | - | 1873103..1873690 (-) | 588 | WP_005714008.1 | FMN-dependent NADH-azoreductase | - |
| JT17_RS09170 (JT17_09430) | waaF | 1873786..1874838 (-) | 1053 | WP_044009401.1 | lipopolysaccharide heptosyltransferase II | - |
| JT17_RS09175 (JT17_09435) | - | 1874847..1875203 (-) | 357 | WP_232422199.1 | MliC family protein | - |
| JT17_RS09180 (JT17_09440) | - | 1875305..1876570 (-) | 1266 | WP_044009403.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| JT17_RS09185 (JT17_09445) | comEA/comE1 | 1876828..1877169 (+) | 342 | WP_010786294.1 | ComEA family DNA-binding protein | Machinery gene |
| JT17_RS09190 (JT17_09450) | - | 1877269..1877717 (-) | 449 | Protein_1808 | IS5 family transposase | - |
| JT17_RS09195 (JT17_09455) | epmA | 1877858..1878838 (+) | 981 | WP_041603142.1 | elongation factor P--(R)-beta-lysine ligase | - |
| JT17_RS09200 (JT17_09460) | - | 1878891..1879169 (+) | 279 | WP_005714674.1 | DUF1778 domain-containing protein | - |
| JT17_RS09205 (JT17_09465) | - | 1879170..1879667 (+) | 498 | WP_005714675.1 | GNAT family N-acetyltransferase | - |
| JT17_RS09210 (JT17_09470) | - | 1879681..1880463 (+) | 783 | WP_044009404.1 | TatD family hydrolase | - |
| JT17_RS09215 (JT17_09475) | - | 1880501..1881028 (+) | 528 | WP_021114781.1 | DUF1523 family protein | - |
| JT17_RS09220 (JT17_09480) | lpxH | 1881142..1881870 (+) | 729 | WP_005712084.1 | UDP-2,3-diacylglucosamine diphosphatase | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12407.27 Da Isoelectric Point: 9.8972
>NTDB_id=127489 JT17_RS09185 WP_010786294.1 1876828..1877169(+) (comEA/comE1) [Glaesserella parasuis strain KL0318]
MKKLSRYTFSLLFGLFSATTFAEEKVTTSTEPTPVVMQQVAATQKVNANVVNINTATASEIQDKLVGIGAKKAQAIVEYR
EKNGKFLNVEQLTEVSGIGKATLEKNRDRIVIE
MKKLSRYTFSLLFGLFSATTFAEEKVTTSTEPTPVVMQQVAATQKVNANVVNINTATASEIQDKLVGIGAKKAQAIVEYR
EKNGKFLNVEQLTEVSGIGKATLEKNRDRIVIE
Nucleotide
Download Length: 342 bp
>NTDB_id=127489 JT17_RS09185 WP_010786294.1 1876828..1877169(+) (comEA/comE1) [Glaesserella parasuis strain KL0318]
ATGAAAAAACTTTCTCGTTACACATTCAGTCTTTTATTTGGGCTTTTCTCTGCAACAACATTTGCTGAAGAAAAAGTAAC
TACGTCAACAGAACCTACACCAGTAGTGATGCAACAAGTCGCAGCGACACAAAAAGTAAATGCGAATGTTGTAAATATCA
ATACTGCGACAGCCTCAGAAATCCAAGATAAGTTAGTAGGTATTGGAGCGAAAAAGGCTCAGGCAATTGTGGAATATCGT
GAGAAAAACGGTAAGTTTTTAAATGTTGAGCAGCTCACCGAAGTTTCAGGTATCGGGAAAGCGACACTTGAAAAAAACCG
AGATCGTATTGTGATTGAATAA
ATGAAAAAACTTTCTCGTTACACATTCAGTCTTTTATTTGGGCTTTTCTCTGCAACAACATTTGCTGAAGAAAAAGTAAC
TACGTCAACAGAACCTACACCAGTAGTGATGCAACAAGTCGCAGCGACACAAAAAGTAAATGCGAATGTTGTAAATATCA
ATACTGCGACAGCCTCAGAAATCCAAGATAAGTTAGTAGGTATTGGAGCGAAAAAGGCTCAGGCAATTGTGGAATATCGT
GAGAAAAACGGTAAGTTTTTAAATGTTGAGCAGCTCACCGAAGTTTCAGGTATCGGGAAAGCGACACTTGAAAAAAACCG
AGATCGTATTGTGATTGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
98.23 |
100 |
0.982 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
59.13 |
100 |
0.602 |