Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | VT08_RS00665 | Genome accession | NZ_CP011069 |
| Coordinates | 104279..104563 (+) | Length | 94 a.a. |
| NCBI ID | WP_011284422.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain STAB09014 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 99279..109563
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VT08_RS00640 (VT08_00640) | - | 101225..101590 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| VT08_RS00645 (VT08_00645) | comGA | 101683..102621 (+) | 939 | WP_011284420.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| VT08_RS00650 (VT08_00650) | comGB | 102557..103591 (+) | 1035 | WP_227868694.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| VT08_RS00655 (VT08_00655) | comGC | 103593..103919 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| VT08_RS00660 (VT08_00660) | comGD | 103894..104322 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| VT08_RS00665 (VT08_00665) | comGE | 104279..104563 (+) | 285 | WP_011284422.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| VT08_RS00670 (VT08_00670) | comGF | 104556..104990 (+) | 435 | WP_002992738.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| VT08_RS00675 (VT08_00675) | comGG | 104974..105300 (+) | 327 | WP_010921801.1 | competence type IV pilus minor pilin ComGG | - |
| VT08_RS00680 (VT08_00680) | comGH | 105398..106351 (+) | 954 | WP_010921802.1 | class I SAM-dependent methyltransferase | Machinery gene |
| VT08_RS00685 (VT08_00685) | - | 106410..107606 (+) | 1197 | WP_011284424.1 | acetate kinase | - |
| VT08_RS00690 (VT08_00690) | - | 107793..108101 (+) | 309 | WP_011284425.1 | hypothetical protein | - |
| VT08_RS00695 (VT08_00695) | proC | 108184..108954 (-) | 771 | WP_011284426.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10654.59 Da Isoelectric Point: 8.9043
>NTDB_id=126012 VT08_RS00665 WP_011284422.1 104279..104563(+) (comGE) [Streptococcus pyogenes strain STAB09014]
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEITLNGCHITILRTDRY
ISIHDDEGEVMKIE
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEITLNGCHITILRTDRY
ISIHDDEGEVMKIE
Nucleotide
Download Length: 285 bp
>NTDB_id=126012 VT08_RS00665 WP_011284422.1 104279..104563(+) (comGE) [Streptococcus pyogenes strain STAB09014]
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATCGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATAACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATCGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATAACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
38.298 |
100 |
0.383 |