Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ABUW_RS01570 | Genome accession | NZ_CP008706 |
| Coordinates | 343566..343991 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788336.1 | Uniprot ID | A0A0J0ZME6 |
| Organism | Acinetobacter baumannii strain AB5075-UW | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 338566..348991
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUW_RS01560 (ABUW_0317) | pilY1 | 339222..343076 (+) | 3855 | WP_000768943.1 | VWA domain-containing protein | Machinery gene |
| ABUW_RS01565 (ABUW_0318) | pilY2 | 343087..343569 (+) | 483 | WP_001046489.1 | type IV pilin protein | Machinery gene |
| ABUW_RS01570 (ABUW_0319) | pilE | 343566..343991 (+) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| ABUW_RS01575 (ABUW_0320) | rpsP | 344138..344389 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABUW_RS01580 (ABUW_0321) | rimM | 344409..344957 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ABUW_RS01585 (ABUW_0322) | trmD | 345003..345743 (+) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABUW_RS01590 (ABUW_0323) | rplS | 345951..346319 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ABUW_RS01595 (ABUW_0324) | - | 346371..347312 (-) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| ABUW_RS01600 (ABUW_0325) | - | 347427..348458 (-) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15175.41 Da Isoelectric Point: 7.8144
>NTDB_id=123775 ABUW_RS01570 WP_000788336.1 343566..343991(+) (pilE) [Acinetobacter baumannii strain AB5075-UW]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=123775 ABUW_RS01570 WP_000788336.1 343566..343991(+) (pilE) [Acinetobacter baumannii strain AB5075-UW]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.071 |
100 |
0.901 |
| comF | Acinetobacter baylyi ADP1 |
49.286 |
99.291 |
0.489 |