Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   CJM129_RS07200 Genome accession   NZ_CP007749
Coordinates   1381997..1382512 (-) Length   171 a.a.
NCBI ID   WP_002799196.1    Uniprot ID   Q0P8R6
Organism   Campylobacter jejuni subsp. jejuni M129     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1376997..1387512
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJM129_RS07185 (CJM129_6945) - 1377109..1378926 (-) 1818 WP_071306812.1 motility associated factor glycosyltransferase family protein -
  CJM129_RS07190 (CJM129_6950) - 1378923..1380746 (-) 1824 WP_020836874.1 motility associated factor glycosyltransferase family protein -
  CJM129_RS07195 (CJM129_6955) - 1380756..1381997 (-) 1242 WP_002864247.1 DUF2920 family protein -
  CJM129_RS07200 (CJM129_6960) ctsG 1381997..1382512 (-) 516 WP_002799196.1 type II secretion system protein Machinery gene
  CJM129_RS07205 (CJM129_6965) tsaD 1382513..1383520 (-) 1008 WP_071306813.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  CJM129_RS07215 (CJM129_6975) - 1383517..1384910 (-) 1394 Protein_1406 M99 family carboxypeptidase catalytic domain-containing protein -
  CJM129_RS07220 (CJM129_6980) dxr 1384912..1385982 (-) 1071 WP_002860792.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  CJM129_RS07225 (CJM129_6985) cdsA 1385979..1386704 (-) 726 WP_002875974.1 phosphatidate cytidylyltransferase -
  CJM129_RS07230 (CJM129_6990) - 1386713..1387051 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18678.56 Da        Isoelectric Point: 6.4682

>NTDB_id=123084 CJM129_RS07200 WP_002799196.1 1381997..1382512(-) (ctsG) [Campylobacter jejuni subsp. jejuni M129]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=123084 CJM129_RS07200 WP_002799196.1 1381997..1382512(-) (ctsG) [Campylobacter jejuni subsp. jejuni M129]
ATGAAAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTGGGAATTTTAGCCGCTATTGCTTTGCCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAACAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8R6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

94.152

100

0.942

Multiple sequence alignment