Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | EX97_RS08220 | Genome accession | NZ_CP007690 |
| Coordinates | 1654623..1654922 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain UA-S391_USA300 isolate abscess/wound isolate | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1649623..1659922
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EX97_RS08195 (EX97_07840) | gcvPA | 1650835..1652181 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| EX97_RS08200 (EX97_07845) | gcvT | 1652201..1653292 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| EX97_RS08205 (EX97_07850) | - | 1653451..1653975 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| EX97_RS08210 | - | 1653965..1654111 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| EX97_RS08215 (EX97_07855) | comGF | 1654208..1654705 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EX97_RS08220 (EX97_07860) | comGE | 1654623..1654922 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| EX97_RS08225 (EX97_07865) | comGD | 1654909..1655355 (-) | 447 | WP_001791635.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EX97_RS08230 (EX97_07870) | comGC | 1655333..1655644 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EX97_RS08235 (EX97_07875) | comGB | 1655658..1656728 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EX97_RS08240 (EX97_07880) | comGA | 1656700..1657674 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EX97_RS08245 (EX97_07885) | - | 1657726..1658349 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| EX97_RS08250 (EX97_07890) | - | 1658346..1658675 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| EX97_RS08255 (EX97_07895) | - | 1658675..1659661 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| EX97_RS08260 (EX97_07900) | - | 1659658..1659861 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=122722 EX97_RS08220 WP_000844413.1 1654623..1654922(-) (comGE) [Staphylococcus aureus strain UA-S391_USA300 isolate abscess/wound isolate]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=122722 EX97_RS08220 WP_000844413.1 1654623..1654922(-) (comGE) [Staphylococcus aureus strain UA-S391_USA300 isolate abscess/wound isolate]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |