Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   MA06_RS08370 Genome accession   NZ_CP007626
Coordinates   1205485..1206279 (-) Length   264 a.a.
NCBI ID   WP_003208448.1    Uniprot ID   A0A2A8B6E2
Organism   Bacillus pseudomycoides strain 219298     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1200485..1211279
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MA06_RS08345 (DJ92_1267) - 1201992..1202225 (+) 234 WP_003200204.1 DUF2627 domain-containing protein -
  MA06_RS08350 (DJ92_1268) - 1202262..1202990 (-) 729 WP_006095952.1 glycerophosphodiester phosphodiesterase -
  MA06_RS29060 (DJ92_1269) - 1203041..1203187 (+) 147 WP_003200201.1 YycC family protein -
  MA06_RS08355 (DJ92_1270) - 1203556..1204653 (+) 1098 WP_018780788.1 RapH N-terminal domain-containing protein -
  MA06_RS08360 (DJ92_1271) - 1204653..1204946 (+) 294 WP_018780787.1 hypothetical protein -
  MA06_RS08365 (DJ92_1272) - 1205126..1205320 (-) 195 WP_018780786.1 hypothetical protein -
  MA06_RS08370 (DJ92_1273) spo0A 1205485..1206279 (-) 795 WP_003208448.1 sporulation transcription factor Spo0A Regulator
  MA06_RS08375 (DJ92_1274) spoIVB 1206566..1207867 (-) 1302 WP_003208450.1 SpoIVB peptidase -
  MA06_RS08380 (DJ92_1275) recN 1207986..1209725 (-) 1740 WP_018766169.1 DNA repair protein RecN Machinery gene
  MA06_RS08385 (DJ92_1276) argR 1209998..1210447 (-) 450 WP_001032579.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29523.31 Da        Isoelectric Point: 7.4719

>NTDB_id=121750 MA06_RS08370 WP_003208448.1 1205485..1206279(-) (spo0A) [Bacillus pseudomycoides strain 219298]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGIAYNGQECLNLLKEKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTGHIRQVSGKTNTTIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=121750 MA06_RS08370 WP_003208448.1 1205485..1206279(-) (spo0A) [Bacillus pseudomycoides strain 219298]
GTGGAGAAAATTAAAGTGTGTCTTGTGGATGATAATAAGGAACTAGTATCAATGCTAGAAAGTTATGTTGCTGCTCAAGA
TGATATGGAAGTAATCGGAATTGCTTATAATGGTCAAGAGTGTTTGAATTTACTGAAGGAGAAACAACCTGATGTACTTG
TTTTAGATATTATTATGCCACATTTAGATGGTTTAGCGGTGCTGGAAAAAATGCGTCATATTGAACGACTAAGACAGCCG
AATGTGATTATGTTAACGGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGATTTAGGTGCTTCTTATTTCATTTT
AAAGCCATTTGATATGGAAAATTTAACGGGTCATATTCGTCAAGTAAGCGGTAAAACGAATACTACAATTAAACGTCCAC
TACCATCTTTCCGATCTGCAACAACAGTAGATGGAAAACCGAAGAATCTAGATGCGAGTATTACAAGCATTATTCACGAA
ATTGGTGTACCAGCTCATATTAAAGGATATATGTATTTGCGAGAGGCAATTTCTATGGTATATAACGATATCGAGCTTCT
TGGTTCTATTACGAAAGTCTTATACCCGGATATTGCGAAAAAATATAATACGACAGCAAGCCGTGTGGAACGCGCAATCC
GTCATGCGATTGAAGTAGCGTGGAGTCGTGGGAATATTGATTCAATCTCGTCCTTATTTGGCTATACTGTATCGATGTCA
AAAGCAAAACCTACGAATTCCGAATTCATCGCAATGGTTGCAGATAAGTTGAGGCTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A8B6E2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

81.648

100

0.826

Multiple sequence alignment