Detailed information
Bioinformatically predicted
Overview
| Name | codY | Type | Regulator |
| Locus tag | DJ48_RS02585 | Genome accession | NZ_CP007618 |
| Coordinates | 372874..373653 (+) | Length | 259 a.a. |
| NCBI ID | WP_000421288.1 | Uniprot ID | Q81WK7 |
| Organism | Bacillus anthracis strain 2000031021 | ||
| Function | repression of comK (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 334050..407980 | 372874..373653 | within | 0 |
Gene organization within MGE regions
Location: 334050..407980
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DJ48_RS02395 (DJ48_377) | rsmB | 334208..335542 (+) | 1335 | WP_001249680.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| DJ48_RS02400 (DJ48_378) | rlmN | 335547..336635 (+) | 1089 | WP_000450543.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| DJ48_RS02405 (DJ48_379) | - | 336640..337392 (+) | 753 | WP_000648699.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| DJ48_RS02410 (DJ48_380) | prkC | 337401..339374 (+) | 1974 | WP_000904759.1 | serine/threonine protein kinase PrkC | - |
| DJ48_RS02415 (DJ48_381) | rsgA | 339643..340524 (+) | 882 | WP_001113935.1 | ribosome small subunit-dependent GTPase A | - |
| DJ48_RS02420 (DJ48_382) | rpe | 340527..341171 (+) | 645 | WP_000589966.1 | ribulose-phosphate 3-epimerase | - |
| DJ48_RS02425 (DJ48_383) | - | 341271..341951 (+) | 681 | WP_025388434.1 | thiamine diphosphokinase | - |
| DJ48_RS02430 | spoVM | 342018..342098 (+) | 81 | WP_001213599.1 | stage V sporulation protein SpoVM | - |
| DJ48_RS02435 (DJ48_384) | rpmB | 342171..342359 (-) | 189 | WP_000124778.1 | 50S ribosomal protein L28 | - |
| DJ48_RS02440 (DJ48_385) | - | 342738..343100 (+) | 363 | WP_000021109.1 | Asp23/Gls24 family envelope stress response protein | - |
| DJ48_RS02445 (DJ48_386) | - | 343123..344799 (+) | 1677 | WP_000027136.1 | DAK2 domain-containing protein | - |
| DJ48_RS02450 (DJ48_387) | recG | 345089..347137 (+) | 2049 | WP_001006884.1 | ATP-dependent DNA helicase RecG | - |
| DJ48_RS02455 (DJ48_388) | fapR | 347226..347819 (+) | 594 | WP_000747355.1 | transcription factor FapR | - |
| DJ48_RS02460 (DJ48_389) | plsX | 347816..348808 (+) | 993 | WP_000684111.1 | phosphate acyltransferase PlsX | - |
| DJ48_RS02465 (DJ48_390) | fabD | 348823..349767 (+) | 945 | WP_000516948.1 | ACP S-malonyltransferase | - |
| DJ48_RS02470 (DJ48_391) | fabG | 349767..350507 (+) | 741 | WP_000911782.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| DJ48_RS02475 (DJ48_392) | acpP | 350577..350810 (+) | 234 | WP_000786062.1 | acyl carrier protein | - |
| DJ48_RS02480 (DJ48_393) | rncS | 350869..351606 (+) | 738 | WP_001146873.1 | ribonuclease III | - |
| DJ48_RS02485 (DJ48_394) | smc | 351753..355322 (+) | 3570 | WP_000478986.1 | chromosome segregation protein SMC | - |
| DJ48_RS02490 (DJ48_395) | ftsY | 355338..356327 (+) | 990 | WP_000007650.1 | signal recognition particle-docking protein FtsY | - |
| DJ48_RS02495 (DJ48_396) | - | 356461..356793 (+) | 333 | WP_000891062.1 | putative DNA-binding protein | - |
| DJ48_RS02500 (DJ48_397) | ffh | 356806..358155 (+) | 1350 | WP_000863456.1 | signal recognition particle protein | - |
| DJ48_RS02505 (DJ48_398) | rpsP | 358256..358528 (+) | 273 | WP_000268750.1 | 30S ribosomal protein S16 | - |
| DJ48_RS02510 (DJ48_399) | - | 358543..358770 (+) | 228 | WP_000737398.1 | KH domain-containing protein | - |
| DJ48_RS02515 (DJ48_400) | rimM | 358891..359406 (+) | 516 | WP_000170268.1 | ribosome maturation factor RimM | - |
| DJ48_RS02520 (DJ48_401) | trmD | 359406..360140 (+) | 735 | WP_000686892.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| DJ48_RS02525 (DJ48_402) | rplS | 360287..360631 (+) | 345 | WP_001186516.1 | 50S ribosomal protein L19 | - |
| DJ48_RS02530 (DJ48_403) | lepB | 360733..361284 (+) | 552 | WP_000711857.1 | signal peptidase I | - |
| DJ48_RS02535 (DJ48_404) | ylqF | 361305..362195 (+) | 891 | WP_000236696.1 | ribosome biogenesis GTPase YlqF | - |
| DJ48_RS02540 (DJ48_405) | rnhB | 362247..363020 (+) | 774 | WP_001174712.1 | ribonuclease HII | - |
| DJ48_RS02545 (DJ48_406) | sucC | 363214..364374 (+) | 1161 | WP_001020786.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| DJ48_RS02550 (DJ48_407) | sucD | 364395..365297 (+) | 903 | WP_000115178.1 | succinate--CoA ligase subunit alpha | - |
| DJ48_RS02555 (DJ48_408) | dprA | 365385..366254 (+) | 870 | WP_000818036.1 | DNA-processing protein DprA | - |
| DJ48_RS02560 (DJ48_409) | topA | 366399..368477 (+) | 2079 | WP_001286969.1 | type I DNA topoisomerase | - |
| DJ48_RS02565 (DJ48_410) | trmFO | 368528..369832 (+) | 1305 | WP_009879846.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| DJ48_RS02570 (DJ48_411) | xerC | 369898..370797 (+) | 900 | WP_001101227.1 | tyrosine recombinase XerC | - |
| DJ48_RS02575 (DJ48_412) | hslV | 370840..371382 (+) | 543 | WP_000526272.1 | ATP-dependent protease proteolytic subunit HslV | - |
| DJ48_RS02580 (DJ48_413) | hslU | 371405..372796 (+) | 1392 | WP_000550088.1 | ATP-dependent protease ATPase subunit HslU | - |
| DJ48_RS02585 (DJ48_414) | codY | 372874..373653 (+) | 780 | WP_000421288.1 | GTP-sensing pleiotropic transcriptional regulator CodY | Regulator |
| DJ48_RS02590 (DJ48_415) | rpsB | 374004..374705 (+) | 702 | WP_000111483.1 | 30S ribosomal protein S2 | - |
| DJ48_RS02595 (DJ48_416) | tsf | 374809..375696 (+) | 888 | WP_001018581.1 | translation elongation factor Ts | - |
| DJ48_RS02600 (DJ48_417) | pyrH | 375763..376485 (+) | 723 | WP_000042663.1 | UMP kinase | - |
| DJ48_RS02605 (DJ48_418) | frr | 376488..377045 (+) | 558 | WP_000531503.1 | ribosome recycling factor | - |
| DJ48_RS02610 (DJ48_419) | uppS | 377131..377907 (+) | 777 | WP_000971301.1 | isoprenyl transferase | - |
| DJ48_RS02615 (DJ48_420) | cdsA | 377925..378716 (+) | 792 | WP_000813581.1 | phosphatidate cytidylyltransferase | - |
| DJ48_RS02620 (DJ48_421) | dxr | 378740..379882 (+) | 1143 | WP_000790359.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| DJ48_RS02625 (DJ48_422) | rseP | 379899..381155 (+) | 1257 | WP_001090228.1 | RIP metalloprotease RseP | - |
| DJ48_RS02630 (DJ48_423) | - | 381265..382965 (+) | 1701 | WP_000814312.1 | proline--tRNA ligase | - |
| DJ48_RS02635 (DJ48_424) | - | 383090..387391 (+) | 4302 | WP_000059985.1 | PolC-type DNA polymerase III | - |
| DJ48_RS02640 (DJ48_425) | rimP | 387724..388194 (+) | 471 | WP_000359093.1 | ribosome maturation factor RimP | - |
| DJ48_RS02645 (DJ48_426) | nusA | 388212..389318 (+) | 1107 | WP_000102609.1 | transcription termination factor NusA | - |
| DJ48_RS02650 (DJ48_427) | rnpM | 389330..389602 (+) | 273 | WP_000071128.1 | RNase P modulator RnpM | - |
| DJ48_RS02655 (DJ48_428) | - | 389603..389914 (+) | 312 | WP_001286523.1 | YlxQ family RNA-binding protein | - |
| DJ48_RS02660 (DJ48_429) | infB | 389919..391979 (+) | 2061 | WP_000036340.1 | translation initiation factor IF-2 | - |
| DJ48_RS02665 (DJ48_430) | - | 391976..392257 (+) | 282 | WP_000582364.1 | DUF503 domain-containing protein | - |
| DJ48_RS02670 (DJ48_431) | rbfA | 392273..392629 (+) | 357 | WP_000776441.1 | 30S ribosome-binding factor RbfA | - |
| DJ48_RS02675 (DJ48_432) | truB | 392716..393639 (+) | 924 | WP_000399357.1 | tRNA pseudouridine(55) synthase TruB | - |
| DJ48_RS02680 (DJ48_433) | ribF | 393683..394654 (+) | 972 | WP_000766711.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| DJ48_RS02685 (DJ48_434) | rpsO | 394755..395024 (+) | 270 | WP_001229392.1 | 30S ribosomal protein S15 | - |
| DJ48_RS02690 (DJ48_435) | pnp | 395185..397323 (+) | 2139 | WP_000076757.1 | polyribonucleotide nucleotidyltransferase | - |
| DJ48_RS02695 (DJ48_436) | - | 397475..398374 (+) | 900 | WP_000647530.1 | polysaccharide deacetylase family protein | - |
| DJ48_RS02700 (DJ48_437) | - | 398461..399702 (+) | 1242 | WP_000592993.1 | pitrilysin family protein | - |
| DJ48_RS02705 (DJ48_438) | - | 399829..400080 (+) | 252 | WP_001239752.1 | YlmC/YmxH family sporulation protein | - |
| DJ48_RS02710 (DJ48_439) | dpaA | 400355..401257 (+) | 903 | WP_000954726.1 | dipicolinic acid synthetase subunit A | - |
| DJ48_RS02715 (DJ48_440) | dpaB | 401254..401853 (+) | 600 | WP_001049484.1 | dipicolinate synthase subunit B | - |
| DJ48_RS02720 (DJ48_441) | asd | 402004..403050 (+) | 1047 | WP_000414849.1 | aspartate-semialdehyde dehydrogenase | - |
| DJ48_RS02725 (DJ48_442) | dapG | 403074..404306 (+) | 1233 | WP_000692470.1 | aspartate kinase | - |
| DJ48_RS02730 (DJ48_443) | dapA | 404318..405196 (+) | 879 | WP_000564761.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| DJ48_RS02740 (DJ48_444) | - | 405967..407637 (+) | 1671 | WP_000823085.1 | ribonuclease J | - |
Sequence
Protein
Download Length: 259 a.a. Molecular weight: 28774.05 Da Isoelectric Point: 4.7947
>NTDB_id=121677 DJ48_RS02585 WP_000421288.1 372874..373653(+) (codY) [Bacillus anthracis strain 2000031021]
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
Nucleotide
Download Length: 780 bp
>NTDB_id=121677 DJ48_RS02585 WP_000421288.1 372874..373653(+) (codY) [Bacillus anthracis strain 2000031021]
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| codY | Bacillus subtilis subsp. subtilis str. 168 |
81.081 |
100 |
0.811 |
| codY | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.667 |
98.456 |
0.459 |