Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CH52_RS11925 | Genome accession | NZ_CP007454 |
| Coordinates | 2312438..2312737 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844410.1 | Uniprot ID | A0A7R6NZL1 |
| Organism | Staphylococcus aureus strain 502A isolate RN6607 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2307438..2317737
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH52_RS11885 (CH52_11330) | - | 2307499..2307702 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| CH52_RS11890 (CH52_11335) | - | 2307699..2308685 (+) | 987 | WP_000161311.1 | ROK family glucokinase | - |
| CH52_RS11895 (CH52_11340) | - | 2308685..2309014 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CH52_RS11900 (CH52_11345) | - | 2309011..2309634 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| CH52_RS11905 (CH52_11350) | comGA | 2309686..2310660 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CH52_RS11910 (CH52_11355) | comGB | 2310632..2311702 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CH52_RS11915 (CH52_11360) | comGC | 2311716..2312027 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CH52_RS11920 (CH52_11365) | comGD | 2312005..2312451 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CH52_RS11925 (CH52_11370) | comGE | 2312438..2312737 (+) | 300 | WP_000844410.1 | hypothetical protein | Machinery gene |
| CH52_RS11930 (CH52_11375) | comGF | 2312655..2313152 (+) | 498 | WP_001788897.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CH52_RS11935 | - | 2313249..2313395 (+) | 147 | WP_001792109.1 | hypothetical protein | - |
| CH52_RS11940 (CH52_11380) | - | 2313385..2313909 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| CH52_RS11945 (CH52_11385) | gcvT | 2314068..2315159 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CH52_RS11950 (CH52_11390) | gcvPA | 2315179..2316525 (+) | 1347 | WP_000019691.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11079.18 Da Isoelectric Point: 9.9215
>NTDB_id=119508 CH52_RS11925 WP_000844410.1 2312438..2312737(+) (comGE) [Staphylococcus aureus strain 502A isolate RN6607]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=119508 CH52_RS11925 WP_000844410.1 2312438..2312737(+) (comGE) [Staphylococcus aureus strain 502A isolate RN6607]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |