Detailed information NTG0119211

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: Q433_RS08575
• Genome accession: NZ_CP007409
• Coordinates: 1632802..1633581 (+)
• Length: 259 a.a.
• NCBI ID: WP_003220850.1
• Uniprot ID: G4NSM6
• Organism: Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1627802..1638581

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q433_RS08555 (Q433_09220)	trmFO	1628495..1629802 (+)	1308	WP_029317796.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
Q433_RS08560 (Q433_09225)	xerC	1629870..1630784 (+)	915	WP_003231988.1	tyrosine recombinase XerC	-
Q433_RS08565 (Q433_09230)	clpQ	1630797..1631342 (+)	546	WP_003238555.1	ATP-dependent protease subunit ClpQ	-
Q433_RS08570 (Q433_09235)	hslU	1631350..1632762 (+)	1413	WP_255220399.1	HslU--HslV peptidase ATPase subunit	-
Q433_RS08575 (Q433_09240)	codY	1632802..1633581 (+)	780	WP_003220850.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
Q433_RS08580 (Q433_09245)	flgB	1633961..1634350 (+)	390	WP_003245656.1	flagellar basal body rod protein FlgB	-
Q433_RS08585 (Q433_09250)	flgC	1634350..1634802 (+)	453	WP_003245521.1	flagellar basal body rod protein FlgC	-
Q433_RS08590 (Q433_09255)	fliE	1634813..1635133 (+)	321	WP_038428147.1	flagellar hook-basal body complex protein FliE	-
Q433_RS08595 (Q433_09260)	fliF	1635179..1636789 (+)	1611	WP_051388163.1	flagellar basal-body MS-ring/collar protein FliF	-
Q433_RS08600 (Q433_09265)	fliG	1636802..1637818 (+)	1017	WP_003231981.1	flagellar motor switch protein FliG	-
Q433_RS08605 (Q433_09270)	fliH	1637811..1638563 (+)	753	WP_038428148.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29013.22 Da
• Isoelectric Point: 4.6514

>NTDB_id=119211 Q433_RS08575 WP_003220850.1 1632802..1633581(+) (codY) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTKNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=119211 Q433_RS08575 WP_003220850.1 1632802..1633581(+) (codY) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
ATGGCTTTATTACAAAAAACAAGAATTATTAACTCCATGCTGCAAGCTGCGGCAGGGAAACCGGTAAACTTCAAGGAAAT
GGCGGAGACGCTGCGGGATGTAATTGATTCCAATATTTTCGTTGTAAGCCGCAGAGGGAAACTCCTTGGGTATTCTATTA
ACCAGCAAATTGAAAATGATCGTATGAAAAAAATGCTTGAGGATCGTCAATTCCCTGAAGAATATACGAAAAATCTGTTT
AATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCA
AGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATC
AATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAA
GAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAGCAAT
TGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCC
GTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGGTGTTATCGAGTCTAGATCATTAGGAATGAAAGGTACT
TATATCAAGGTACTAAACAACAAATTCCTAATTGAATTAGAAAATCTAAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

3D structure

• AlphaFold DB: G4NSM6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	100	100	1
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.451	98.456	0.467