Detailed information NTG0118074

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: STAB904_RS01410
• Genome accession: NZ_CP007241
• Coordinates: 266775..267698 (+)
• Length: 307 a.a.
• NCBI ID: WP_038433906.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain 1E1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 261775..272698

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STAB904_RS01395 (STAB904_01550)	amiC	263275..264777 (+)	1503	WP_011017334.1	ABC transporter permease	Regulator
STAB904_RS01400 (STAB904_01555)	amiD	264777..265703 (+)	927	WP_002986004.1	oligopeptide ABC transporter permease OppC	Regulator
STAB904_RS01405 (STAB904_01560)	amiE	265712..266782 (+)	1071	WP_010921893.1	ABC transporter ATP-binding protein	Regulator
STAB904_RS01410 (STAB904_01565)	amiF	266775..267698 (+)	924	WP_038433906.1	ABC transporter ATP-binding protein	Regulator
STAB904_RS09630	-	267736..267825 (-)	90	WP_110002794.1	IS3 family transposase	-
STAB904_RS01415 (STAB904_01570)	-	267846..268025 (-)	180	WP_023612403.1	hypothetical protein	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34714.96 Da
• Isoelectric Point: 6.9302

>NTDB_id=118074 STAB904_RS01410 WP_038433906.1 266775..267698(+) (amiF) [Streptococcus pyogenes strain 1E1]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAKVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERQKELVVYHPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=118074 STAB904_RS01410 WP_038433906.1 266775..267698(+) (amiF) [Streptococcus pyogenes strain 1E1]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAATCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGTTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAATCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGGGCAACCGTTGA
CTACATCATTTCAGAAGGTCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCAAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCTCATGAATTTTCAGGAGGTCAACGTCAGCGGATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAACCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTTTTAAACCTTCTCAAACGGATGCAAGCCGAAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TGTTGTCTATCATCCAGACCAGCATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.026	99.674	0.818
amiF	Streptococcus thermophilus LMD-9	81.699	99.674	0.814
amiF	Streptococcus salivarius strain HSISS4	81.699	99.674	0.814