Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   BD29_RS06490 Genome accession   NZ_CP007190
Coordinates   1271331..1271846 (-) Length   171 a.a.
NCBI ID   WP_002872668.1    Uniprot ID   A0A5Y9KN14
Organism   Campylobacter jejuni strain HF5-7-1     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1266331..1276846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BD29_RS06475 (BD29_06460) - 1266432..1268249 (-) 1818 WP_075888388.1 motility associated factor glycosyltransferase family protein -
  BD29_RS06480 (BD29_06465) - 1268246..1270078 (-) 1833 WP_075888389.1 motility associated factor glycosyltransferase family protein -
  BD29_RS06485 (BD29_06470) - 1270090..1271331 (-) 1242 WP_052785485.1 DUF2920 family protein -
  BD29_RS06490 (BD29_06475) ctsG 1271331..1271846 (-) 516 WP_002872668.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  BD29_RS06495 (BD29_06480) tsaD 1271847..1272854 (-) 1008 WP_052785486.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  BD29_RS06500 (BD29_06485) - 1272851..1274245 (-) 1395 WP_052777897.1 M99 family carboxypeptidase catalytic domain-containing protein -
  BD29_RS06505 (BD29_06490) dxr 1274247..1275317 (-) 1071 WP_052776152.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  BD29_RS06510 (BD29_06495) cdsA 1275314..1276039 (-) 726 WP_002858027.1 phosphatidate cytidylyltransferase -
  BD29_RS06515 (BD29_06500) - 1276048..1276386 (-) 339 WP_022552380.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18675.56 Da        Isoelectric Point: 7.1357

>NTDB_id=117293 BD29_RS06490 WP_002872668.1 1271331..1271846(-) (ctsG) [Campylobacter jejuni strain HF5-7-1]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLRSIKTMSNVSGIENVDLGN
FNGAKEVNFRVGDDKECLKLVFVNKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=117293 BD29_RS06490 WP_002872668.1 1271331..1271846(-) (ctsG) [Campylobacter jejuni strain HF5-7-1]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCGGCTATTGCTTTACCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGATCTATAAAAACGATGAGTAATGTAAGCGGGATTGAAAATGTCGATCTTGGCAAT
TTTAATGGCGCAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTGTAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGCAATAAAGCTTGTGTGATTTTAAGCAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Y9KN14

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936

Multiple sequence alignment