Detailed information NTG0117179

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: YSS_RS05660
• Genome accession: NZ_CP007181
• Coordinates: 1086237..1086974 (+)
• Length: 245 a.a.
• NCBI ID: WP_025399041.1
• Uniprot ID: A0A5T0IN92
• Organism: Campylobacter coli RM4661
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1081237..1091974

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
YSS_RS05630 (YSS_05800)	rpsF	1081384..1081761 (+)	378	WP_002794143.1	30S ribosomal protein S6	-
YSS_RS05635 (YSS_05805)	-	1081770..1082318 (+)	549	WP_002777084.1	single-stranded DNA-binding protein	-
YSS_RS05640 (YSS_05810)	rpsR	1082329..1082589 (+)	261	WP_002777087.1	30S ribosomal protein S18	-
YSS_RS05645 (YSS_05815)	lon	1082646..1085021 (-)	2376	WP_025399040.1	endopeptidase La	-
YSS_RS05650 (YSS_05820)	bamD	1085037..1085684 (-)	648	WP_002780248.1	outer membrane protein assembly factor BamD	-
YSS_RS05655 (YSS_05825)	fliW	1085848..1086237 (+)	390	WP_002777093.1	flagellar assembly protein FliW	-
YSS_RS05660 (YSS_05830)	proC	1086237..1086974 (+)	738	WP_025399041.1	pyrroline-5-carboxylate reductase	Machinery gene
YSS_RS05665 (YSS_05835)	-	1086971..1087276 (+)	306	WP_025399042.1	hypothetical protein	-
YSS_RS05670 (YSS_05840)	-	1087269..1087937 (+)	669	WP_025399043.1	hypothetical protein	-
YSS_RS05675 (YSS_05845)	-	1087934..1088386 (+)	453	WP_002777117.1	hypothetical protein	-
YSS_RS05680 (YSS_05850)	-	1088379..1089008 (-)	630	WP_025399044.1	uroporphyrinogen-III synthase	-
YSS_RS05685 (YSS_05855)	thiE	1088986..1089618 (-)	633	WP_002824853.1	thiamine phosphate synthase	-
YSS_RS05690 (YSS_05860)	thiD	1089608..1090420 (-)	813	WP_002824851.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
YSS_RS05695 (YSS_05865)	-	1090420..1091103 (-)	684	WP_002824849.1	3-methyladenine DNA glycosylase	-
YSS_RS05700 (YSS_05870)	-	1091100..1091861 (-)	762	WP_025399045.1	ATP-binding protein	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26769.19 Da
• Isoelectric Point: 9.4693

>NTDB_id=117179 YSS_RS05660 WP_025399041.1 1086237..1086974(+) (proC) [Campylobacter coli RM4661]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYALNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAATLLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=117179 YSS_RS05660 WP_025399041.1 1086237..1086974(+) (proC) [Campylobacter coli RM4661]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAG
AAATTTTAAATACTTTTGGCAAGGCTTATGCGTTAAACGAAGAAAAACAAATGAATGCTGCCATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCCAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTTT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAACCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATTT
GCTCACCTGCAGGTGTTACTATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTCTTTGAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

3D structure

• AlphaFold DB: A0A5T0IN92

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	80.417	97.959	0.788