Detailed information NTG0117166

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: YSU_RS03570
• Genome accession: NZ_CP007179
• Coordinates: 714537..715274 (-)
• Length: 245 a.a.
• NCBI ID: WP_002780246.1
• Uniprot ID: A0A5T1L8T6
• Organism: Campylobacter coli RM5611
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 709537..720274

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
YSU_RS03530 (YSU_03600)	-	709650..710411 (+)	762	WP_025431509.1	ATP-binding protein	-
YSU_RS03535 (YSU_03605)	-	710408..711091 (+)	684	WP_002780240.1	3-methyladenine DNA glycosylase	-
YSU_RS03540 (YSU_03610)	thiD	711091..711903 (+)	813	WP_002786353.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
YSU_RS03545 (YSU_03615)	thiE	711893..712525 (+)	633	WP_002805014.1	thiamine phosphate synthase	-
YSU_RS03550 (YSU_03620)	-	712503..713132 (+)	630	WP_002783358.1	uroporphyrinogen-III synthase	-
YSU_RS03555 (YSU_03625)	-	713125..713577 (-)	453	WP_002777117.1	hypothetical protein	-
YSU_RS03560 (YSU_03630)	-	713574..714242 (-)	669	WP_002790524.1	hypothetical protein	-
YSU_RS03565 (YSU_03635)	-	714235..714540 (-)	306	WP_002790525.1	hypothetical protein	-
YSU_RS03570 (YSU_03640)	proC	714537..715274 (-)	738	WP_002780246.1	pyrroline-5-carboxylate reductase	Machinery gene
YSU_RS03575 (YSU_03645)	fliW	715274..715663 (-)	390	WP_002777093.1	flagellar assembly protein FliW	-
YSU_RS03580 (YSU_03650)	-	715827..716474 (+)	648	WP_002777091.1	outer membrane protein assembly factor BamD	-
YSU_RS03585 (YSU_03655)	lon	716490..718865 (+)	2376	WP_002805015.1	endopeptidase La	-
YSU_RS03590 (YSU_03660)	rpsR	718921..719181 (-)	261	WP_002777087.1	30S ribosomal protein S18	-
YSU_RS03595 (YSU_03665)	-	719192..719740 (-)	549	WP_002777084.1	single-stranded DNA-binding protein	-
YSU_RS03600 (YSU_03670)	rpsF	719749..720126 (-)	378	WP_002777082.1	30S ribosomal protein S6	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26797.20 Da
• Isoelectric Point: 9.3032

>NTDB_id=117166 YSU_RS03570 WP_002780246.1 714537..715274(-) (proC) [Campylobacter coli RM5611]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYELNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=117166 YSU_RS03570 WP_002780246.1 714537..715274(-) (proC) [Campylobacter coli RM5611]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAG
AAATTTTAAATACTTTTGGCAAGGCTTATGAGTTAAACGAAGAAAAACAAATGAATGCTGCGATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCTAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTTT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAGCCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACCATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTTTTTGAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

3D structure

• AlphaFold DB: A0A5T1L8T6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	80.833	97.959	0.792