Detailed information NTG1167696

Bioinformatically predicted

Overview

• Name: rcrQ
• Type: Regulator
• Locus tag: AB2L76_RS10040
• Genome accession: NZ_OZ116715
• Coordinates: 2018587..2020440 (-)
• Length: 617 a.a.
• NCBI ID: WP_003537635.1
• Uniprot ID: B0N5N8
• Organism: Thomasclavelia ramosa strain Marseille-Q9705
• Function: regulate competence (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	2005513..2025148	2018587..2020440	within	0

Gene organization within MGE regions

Location: 2005513..2025148

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB2L76_RS09960	-	2005513..2006118 (-)	606	WP_009300264.1	recombinase family protein	-
AB2L76_RS09965	-	2006137..2006484 (-)	348	WP_118263819.1	TnpV protein	-
AB2L76_RS09970	-	2006744..2007157 (-)	414	WP_009300262.1	hypothetical protein	-
AB2L76_RS09975	-	2007254..2007628 (-)	375	WP_118263820.1	plasmid mobilization protein	-
AB2L76_RS09980	-	2007612..2008648 (-)	1037	Protein_1972	site-specific integrase	-
AB2L76_RS09985	-	2008635..2008838 (-)	204	WP_009300259.1	transcriptional regulator	-
AB2L76_RS09990	-	2009017..2009598 (+)	582	WP_118263821.1	helix-turn-helix domain-containing protein	-
AB2L76_RS09995	guaA	2009765..2011312 (-)	1548	WP_117582026.1	glutamine-hydrolyzing GMP synthase	-
AB2L76_RS10000	-	2011324..2012595 (-)	1272	WP_270349437.1	adenylosuccinate synthase	-
AB2L76_RS10005	-	2012766..2013653 (+)	888	WP_003537655.1	LysR family transcriptional regulator	-
AB2L76_RS10010	-	2013688..2013939 (-)	252	WP_003537653.1	hypothetical protein	-
AB2L76_RS10015	-	2013949..2015019 (-)	1071	WP_003537650.1	molybdopterin-binding protein	-
AB2L76_RS10020	-	2015256..2015411 (-)	156	WP_003537648.1	DUF6323 family protein	-
AB2L76_RS10025	-	2015899..2016738 (-)	840	WP_008791658.1	DUF368 domain-containing protein	-
AB2L76_RS10030	-	2016803..2017177 (-)	375	WP_008791657.1	DUF3795 domain-containing protein	-
AB2L76_RS10035	-	2017187..2018509 (-)	1323	WP_009009830.1	AAA family ATPase	-
AB2L76_RS10040	rcrQ	2018587..2020440 (-)	1854	WP_003537635.1	ABC transporter ATP-binding protein	Regulator
AB2L76_RS10045	-	2020433..2022661 (-)	2229	WP_009009829.1	ABC transporter ATP-binding protein	-
AB2L76_RS10050	-	2022661..2023113 (-)	453	WP_003537632.1	MarR family winged helix-turn-helix transcriptional regulator	-
AB2L76_RS10055	-	2023540..2023662 (-)	123	WP_008791654.1	hypothetical protein	-
AB2L76_RS10060	-	2023831..2024250 (-)	420	WP_008791653.1	C-GCAxxG-C-C family protein	-
AB2L76_RS10065	-	2024342..2025010 (-)	669	WP_009009828.1	endonuclease/exonuclease/phosphatase family protein	-

Sequence

Protein

• Length: 617 a.a.
• Molecular weight: 67852.03 Da
• Isoelectric Point: 5.2739

>NTDB_id=1167696 AB2L76_RS10040 WP_003537635.1 2018587..2020440(-) (rcrQ) [Thomasclavelia ramosa strain Marseille-Q9705]
MSNQPKRNGPKFGPGGMHGMRGGEKAKDFKGTLGKLFKYLRPYYFRLVIVVIFASASTVFAIVGPKILAKATDKLSEGIM
AKVAGTGGIDFDYIGQIILILVGLYLISALFSYIQGFITSTISQRVAYDLRTSISQKMDRMPLSYFDKHTSGDILSRVTN
DIDTIAQSLNQSMSQVITSTVTVIGIFIMMLTISPVMTLIAVCVLPVSMVLIGLVMKRSQKYFARQQAALGDVNGHIEEM
YGGHNVVKAFNGEAASVEQFNEYNDNLYESAWKSQFFSGLMQPITGFVGNVGYVAVCLLGGVLAGGGSITIGDIQAFIQY
VRQFNQPITQLAQTMNMLQSTAAAAERVFEFLGEEELEPETPKVTADEVAKVEGSVTFADVNFGYLKDQTIINDFSLHVH
AGQTVAIVGPTGAGKTTIVKLLMRFYELNSGSILIDGKDIRDFGRQDLRSLFGMVLQDTWLFNGTIKENLMYGKLDASDE
EVKEACKVAYVDHFVQTLENGYETMINEESSNISQGQKQLLTIARAFLKDPKILILDEATSSVDTRTEVLIQKGMEKLME
GRTSFVIAHRLSTIRDADTIIVMKDGDIVELGNHDSLLAKDGFYASLYRSQFEGSDE

Nucleotide

• Length: 1854 bp

>NTDB_id=1167696 AB2L76_RS10040 WP_003537635.1 2018587..2020440(-) (rcrQ) [Thomasclavelia ramosa strain Marseille-Q9705]
ATGAGTAATCAACCAAAAAGAAATGGTCCTAAATTCGGACCTGGTGGTATGCACGGAATGCGTGGCGGTGAAAAAGCTAA
AGATTTTAAAGGTACTTTAGGTAAATTATTTAAATATTTAAGACCGTATTATTTTCGTTTAGTTATAGTTGTGATTTTTG
CTTCAGCATCAACGGTTTTTGCAATCGTAGGACCAAAGATTTTAGCTAAAGCAACAGATAAATTAAGTGAAGGTATCATG
GCTAAAGTAGCTGGTACTGGTGGAATTGATTTTGATTATATTGGTCAAATTATTTTGATTTTAGTTGGATTGTATTTGAT
TAGTGCTTTATTTAGTTATATACAAGGTTTTATTACTTCAACTATTTCACAACGAGTTGCTTATGATTTAAGAACATCAA
TTTCTCAAAAGATGGATCGGATGCCATTAAGTTATTTTGATAAACATACTAGTGGTGATATTTTAAGCCGAGTAACAAAT
GATATCGATACAATCGCACAATCACTAAATCAAAGTATGTCACAGGTAATTACGTCGACAGTAACGGTAATTGGAATCTT
TATCATGATGTTGACTATTTCACCAGTTATGACTTTGATCGCAGTTTGCGTATTACCAGTATCAATGGTTTTGATTGGTT
TAGTAATGAAACGTTCACAAAAATATTTTGCGCGTCAACAAGCTGCTTTAGGTGATGTCAATGGTCATATTGAAGAAATG
TATGGTGGTCATAATGTGGTTAAAGCATTTAATGGTGAAGCTGCTTCAGTAGAACAATTTAATGAGTATAATGATAATTT
ATATGAAAGTGCTTGGAAGTCACAATTCTTTTCGGGTTTGATGCAGCCAATCACAGGATTTGTTGGAAATGTTGGATACG
TTGCGGTATGTTTATTAGGTGGTGTTCTTGCTGGTGGTGGTAGTATCACAATTGGTGATATTCAGGCCTTTATTCAATAT
GTAAGACAATTTAATCAACCAATAACACAATTAGCACAGACAATGAATATGTTACAAAGTACAGCAGCAGCGGCTGAACG
TGTTTTTGAATTTTTAGGTGAAGAAGAATTAGAACCAGAAACACCAAAAGTTACTGCTGATGAGGTGGCTAAAGTTGAAG
GTTCTGTTACCTTTGCTGATGTTAATTTTGGGTATTTAAAAGATCAAACGATTATTAATGATTTTAGTTTACATGTTCAT
GCGGGGCAAACTGTTGCAATTGTAGGACCGACTGGTGCTGGAAAAACAACGATCGTAAAATTATTAATGCGATTCTATGA
ATTAAATAGTGGTTCGATTCTTATTGATGGTAAAGATATTCGTGATTTTGGACGTCAGGATTTACGATCATTATTTGGAA
TGGTTTTACAAGATACTTGGTTGTTTAATGGAACAATTAAGGAAAACCTAATGTATGGAAAATTAGATGCAAGTGATGAA
GAAGTCAAGGAGGCTTGTAAAGTCGCTTATGTTGATCATTTTGTACAAACATTAGAGAATGGATATGAAACAATGATCAA
TGAGGAATCATCTAACATTTCTCAAGGGCAAAAACAACTTTTAACAATTGCACGTGCTTTCTTAAAAGATCCAAAAATTT
TGATTCTTGATGAAGCAACTTCTTCAGTAGATACAAGAACAGAAGTATTAATTCAAAAAGGAATGGAAAAGCTAATGGAG
GGAAGAACAAGTTTTGTCATTGCCCATCGTTTATCAACAATTCGTGATGCTGACACAATTATTGTAATGAAAGATGGTGA
CATTGTAGAACTTGGAAATCATGATTCATTATTGGCTAAAGATGGCTTCTATGCCTCATTGTATCGTTCTCAATTCGAGG
GATCAGATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (393-541)

• ABC transporter transmembrane region (ABC_membrane) (47-327)

3D structure

• AlphaFold DB: B0N5N8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rcrQ	Streptococcus mutans UA159	52.316	94.489	0.494