Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACI6PA_RS09510 Genome accession   NZ_OY724190
Coordinates   1909967..1910116 (-) Length   49 a.a.
NCBI ID   WP_057867685.1    Uniprot ID   A0AB34AB69
Organism   Companilactobacillus crustorum strain IMDO BLLM15     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1904967..1915116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI6PA_RS09490 (CCBLLM15_CCBLLM15_01924) - 1905173..1906249 (+) 1077 WP_057867681.1 GDSL-type esterase/lipase family protein -
  ACI6PA_RS09495 (CCBLLM15_CCBLLM15_01925) - 1906400..1907116 (+) 717 WP_057867682.1 GntR family transcriptional regulator -
  ACI6PA_RS09500 (CCBLLM15_CCBLLM15_01926) - 1907181..1907912 (-) 732 WP_057867683.1 GntR family transcriptional regulator -
  ACI6PA_RS09505 (CCBLLM15_CCBLLM15_01927) - 1907971..1909620 (-) 1650 WP_057867684.1 alpha,alpha-phosphotrehalase -
  ACI6PA_RS09510 (CCBLLM15_CCBLLM15_01928) rcrQ 1909967..1910116 (-) 150 WP_057867685.1 hypothetical protein Regulator
  ACI6PA_RS09515 (CCBLLM15_CCBLLM15_01929) - 1910478..1911020 (+) 543 WP_057867686.1 GNAT family N-acetyltransferase -
  ACI6PA_RS09520 (CCBLLM15_CCBLLM15_01930) - 1911462..1912145 (-) 684 WP_057867692.1 GTP pyrophosphokinase family protein -
  ACI6PA_RS09525 (CCBLLM15_CCBLLM15_01931) codA 1912212..1913444 (-) 1233 WP_057867687.1 cytosine deaminase -
  ACI6PA_RS09530 (CCBLLM15_CCBLLM15_01932) - 1913642..1914988 (+) 1347 WP_057867688.1 cytosine permease -

Sequence

Protein


Download         Length: 49 a.a.        Molecular weight: 5800.54 Da        Isoelectric Point: 4.1520

>NTDB_id=1160447 ACI6PA_RS09510 WP_057867685.1 1909967..1910116(-) (rcrQ) [Companilactobacillus crustorum strain IMDO BLLM15]
MDYCFLLYKDSDLILVVKDGEIIERGTHTELMNENGFYANMYNSQFTKE

Nucleotide


Download         Length: 150 bp        

>NTDB_id=1160447 ACI6PA_RS09510 WP_057867685.1 1909967..1910116(-) (rcrQ) [Companilactobacillus crustorum strain IMDO BLLM15]
ATGGACTACTGCTTTCTACTATATAAAGATTCGGATTTAATTTTGGTAGTTAAAGATGGCGAAATTATTGAACGAGGAAC
ACATACTGAATTAATGAACGAAAATGGTTTTTATGCAAACATGTATAACAGTCAGTTTACTAAAGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

65.854

83.673

0.551

Multiple sequence alignment