Detailed information NTG1159290

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: QOR61_RS01040
• Genome accession: NZ_OX460960
• Coordinates: 169463..170395 (+)
• Length: 310 a.a.
• NCBI ID: WP_000138507.1
• Uniprot ID: A0AAD3A4P4
• Organism: Streptococcus agalactiae isolate MRI Z2-299
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 164463..175395

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR61_RS01020	-	164675..166330 (+)	1656	WP_017643615.1	peptide ABC transporter substrate-binding protein	-
QOR61_RS01025	-	166449..167363 (+)	915	WP_000598965.1	ABC transporter permease	-
QOR61_RS01030	-	167373..168404 (+)	1032	WP_000764052.1	ABC transporter permease	-
QOR61_RS01035	oppD	168417..169463 (+)	1047	WP_000410290.1	ABC transporter ATP-binding protein	Regulator
QOR61_RS01040	amiF	169463..170395 (+)	933	WP_000138507.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 34845.63 Da
• Isoelectric Point: 6.7314

>NTDB_id=1159290 QOR61_RS01040 WP_000138507.1 169463..170395(+) (amiF) [Streptococcus agalactiae isolate MRI Z2-299]
MTENRKKLVEVKNVSLTFNKGKANEVRAIDNVSFDIYEGEVFGLVGESGSGKTTVGRSILKLYDISDGEITFNGEVISHL
KGKALHSFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHKLAKSKSDRDSKVQALLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGTSDD
VYNNPIHPYTKSLLSAIPEPDPESERQRVHQPYNPAIEQDGQERQMHEITPGHFVLSTSQEAEEYKKQIL

Nucleotide

• Length: 933 bp

>NTDB_id=1159290 QOR61_RS01040 WP_000138507.1 169463..170395(+) (amiF) [Streptococcus agalactiae isolate MRI Z2-299]
ATGACTGAAAATCGAAAAAAATTAGTTGAAGTCAAAAATGTTTCTTTGACCTTCAATAAAGGAAAAGCTAATGAAGTGAG
AGCAATTGATAATGTTAGTTTTGACATTTATGAAGGTGAAGTGTTTGGATTAGTTGGGGAATCTGGATCAGGAAAGACAA
CCGTTGGACGTTCAATTTTAAAACTTTATGATATTTCTGATGGAGAAATTACCTTTAATGGAGAAGTGATCTCACATCTG
AAAGGTAAAGCATTACATAGTTTTCGTAAAGACGCTCAGATGATTTTTCAGGATCCTCAGGCTAGCTTAAACGGCCGTAT
GAAGATTCGTGATATCGTAGCAGAAGGTTTAGACATACATAAATTAGCTAAATCAAAATCAGATCGTGATAGTAAAGTTC
AGGCCCTATTAGATCTTGTAGGGTTAAATAAAGATCATTTAACACGTTATCCGCATGAATTTTCAGGTGGACAACGACAA
CGTATCGGGATTGCACGTGCTTTAGCAGTAGAGCCTAAATTTATCATTGCTGATGAACCAATATCTGCCTTAGATGTTTC
AATCCAAGCACAAGTTGTTAATTTAATGCAAAAATTGCAAAGAGAACAAGGATTGACTTATTTGTTTATCGCACATGATT
TGTCTATGGTAAAATACATTTCAGATCGTATCGGTGTTATGCATTGGGGGAAACTGTTAGAAGTTGGAACATCTGATGAT
GTTTATAACAATCCAATCCACCCTTATACGAAGAGTCTATTATCAGCTATTCCAGAACCAGATCCGGAGAGTGAACGTCA
ACGTGTTCACCAGCCGTATAATCCAGCTATTGAGCAAGACGGACAAGAACGTCAAATGCACGAGATTACACCTGGTCATT
TTGTTTTATCTACATCCCAAGAAGCTGAAGAATATAAAAAACAAATATTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-267)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.545	99.355	0.542
amiF	Streptococcus thermophilus LMG 18311	54.221	99.355	0.539
amiF	Streptococcus salivarius strain HSISS4	54.426	98.387	0.535