Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   QOR47_RS07150 Genome accession   NZ_OX437058
Coordinates   1349956..1350471 (-) Length   171 a.a.
NCBI ID   WP_002903863.1    Uniprot ID   A0AB36G830
Organism   Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1344956..1355471
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR47_RS07135 - 1345059..1346876 (-) 1818 WP_021036356.1 motility associated factor glycosyltransferase family protein -
  QOR47_RS07140 - 1346873..1348696 (-) 1824 WP_054829500.1 motility associated factor glycosyltransferase family protein -
  QOR47_RS07145 - 1348706..1349956 (-) 1251 WP_002903861.1 DUF2920 family protein -
  QOR47_RS07150 ctsG 1349956..1350471 (-) 516 WP_002903863.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  QOR47_RS07155 tsaD 1350472..1351479 (-) 1008 WP_002889944.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  QOR47_RS07160 - 1351476..1352870 (-) 1395 WP_002869556.1 M99 family carboxypeptidase catalytic domain-containing protein -
  QOR47_RS07165 dxr 1352872..1353942 (-) 1071 WP_002871960.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  QOR47_RS07170 cdsA 1353939..1354664 (-) 726 WP_002858027.1 phosphatidate cytidylyltransferase -
  QOR47_RS07175 - 1354673..1355011 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18734.63 Da        Isoelectric Point: 7.2439

>NTDB_id=1158191 QOR47_RS07150 WP_002903863.1 1349956..1350471(-) (ctsG) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
MKKAFTILELVFVIVILGILAAIALPKMSSSKHEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYFLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=1158191 QOR47_RS07150 WP_002903863.1 1349956..1350471(-) (ctsG) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGCATGAAGCCGAGGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTGAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATTTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

92.982

100

0.93

Multiple sequence alignment