Detailed information NTG1157495

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: KJP57_RS09015
• Genome accession: NZ_OX419573
• Coordinates: 1708719..1709498 (+)
• Length: 259 a.a.
• NCBI ID: WP_003220850.1
• Uniprot ID: G4NSM6
• Organism: Bacillus subtilis isolate NRS6085
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1703719..1714498

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP57_RS08995 (NRS6085_08985)	trmFO	1704412..1705719 (+)	1308	WP_213407727.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
KJP57_RS09000 (NRS6085_08990)	xerC	1705787..1706701 (+)	915	WP_003231988.1	tyrosine recombinase XerC	-
KJP57_RS09005 (NRS6085_08995)	clpQ	1706714..1707259 (+)	546	WP_003238555.1	ATP-dependent protease subunit ClpQ	-
KJP57_RS09010 (NRS6085_09000)	hslU	1707267..1708679 (+)	1413	WP_256683486.1	HslU--HslV peptidase ATPase subunit	-
KJP57_RS09015 (NRS6085_09005)	codY	1708719..1709498 (+)	780	WP_003220850.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
KJP57_RS09020 (NRS6085_09010)	flgB	1709878..1710267 (+)	390	WP_213407728.1	flagellar basal body rod protein FlgB	-
KJP57_RS09025 (NRS6085_09015)	flgC	1710267..1710719 (+)	453	WP_014479779.1	flagellar basal body rod protein FlgC	-
KJP57_RS09030 (NRS6085_09020)	fliE	1710730..1711050 (+)	321	WP_003238544.1	flagellar hook-basal body complex protein FliE	-
KJP57_RS09035 (NRS6085_09025)	fliF	1711096..1712706 (+)	1611	WP_051388163.1	flagellar basal-body MS-ring/collar protein FliF	-
KJP57_RS09040 (NRS6085_09030)	fliG	1712719..1713735 (+)	1017	WP_003231981.1	flagellar motor switch protein FliG	-
KJP57_RS09045 (NRS6085_09035)	fliH	1713728..1714480 (+)	753	WP_206647973.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29013.22 Da
• Isoelectric Point: 4.6514

>NTDB_id=1157495 KJP57_RS09015 WP_003220850.1 1708719..1709498(+) (codY) [Bacillus subtilis isolate NRS6085]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTKNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=1157495 KJP57_RS09015 WP_003220850.1 1708719..1709498(+) (codY) [Bacillus subtilis isolate NRS6085]
ATGGCTTTATTACAAAAAACAAGAATTATTAACTCCATGCTGCAAGCTGCGGCAGGGAAACCGGTAAACTTCAAGGAAAT
GGCGGAGACGCTGCGGGATGTAATTGATTCCAATATTTTCGTTGTAAGCCGCAGAGGGAAACTCCTTGGGTATTCTATTA
ACCAGCAAATTGAAAATGATCGTATGAAAAAAATGCTTGAGGATCGTCAATTCCCTGAAGAATATACGAAAAATCTGTTT
AATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCA
AGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCACGTTTACAAGATC
AATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAA
GAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAGCAAT
TGAGCACATTTTTGAGGAGCTTGACGGAAACGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCC
GTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGGTGTTATCGAGTCTAGATCATTAGGAATGAAAGGTACT
TATATCAAGGTACTAAACAACAAATTCTTAATTGAATTAGAAAATCTAAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

3D structure

• AlphaFold DB: G4NSM6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	100	100	1
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.451	98.456	0.467