Detailed information NTG1157094

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: KJP48_RS14970
• Genome accession: NZ_OX419564
• Coordinates: 2814240..2816636 (-)
• Length: 798 a.a.
• NCBI ID: WP_014477509.1
• Uniprot ID: A0A8E0VTN8
• Organism: Bacillus subtilis isolate NRS6127
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2809240..2821636

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP48_RS14935 (NRS6127_14825)	glnQ	2810313..2811041 (+)	729	WP_017696070.1	amino acid ABC transporter ATP-binding protein	-
KJP48_RS14940 (NRS6127_14830)	glnH	2811063..2811884 (+)	822	WP_003245954.1	glutamine ABC transporter substrate-binding protein GlnH	-
KJP48_RS14945 (NRS6127_14835)	glnM	2811945..2812595 (+)	651	WP_029727139.1	amino acid ABC transporter permease	-
KJP48_RS14950 (NRS6127_14840)	glnP	2812612..2813268 (+)	657	WP_003229784.1	amino acid ABC transporter permease	-
KJP48_RS14955 (NRS6127_14845)	yrzQ	2813303..2813434 (-)	132	WP_003229780.1	YrzQ family protein	-
KJP48_RS14960 (NRS6127_14850)	-	2813456..2813647 (-)	192	WP_003225893.1	hypothetical protein	-
KJP48_RS14965 (NRS6127_14855)	yrrD	2813659..2814183 (-)	525	WP_072692710.1	PRC-barrel domain-containing protein	-
KJP48_RS14970 (NRS6127_14860)	recD2	2814240..2816636 (-)	2397	WP_014477509.1	ATP-dependent RecD-like DNA helicase	Machinery gene
KJP48_RS14975 (NRS6127_14865)	yrrB	2816661..2817281 (-)	621	WP_211197310.1	tetratricopeptide repeat protein	-
KJP48_RS14980 (NRS6127_14870)	mnmA	2817367..2818482 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
KJP48_RS14985 (NRS6127_14875)	iscSA	2818510..2819652 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
KJP48_RS14990 (NRS6127_14880)	cymR	2819671..2820087 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
KJP48_RS14995 (NRS6127_14885)	rarA	2820290..2821555 (+)	1266	WP_015714437.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89182.75 Da
• Isoelectric Point: 5.0708

>NTDB_id=1157094 KJP48_RS14970 WP_014477509.1 2814240..2816636(-) (recD2) [Bacillus subtilis isolate NRS6127]
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETT
CLSEGHTYIETEQLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQT
EYENQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSVQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQQ

Nucleotide

• Length: 2397 bp

>NTDB_id=1157094 KJP48_RS14970 WP_014477509.1 2814240..2816636(-) (recD2) [Bacillus subtilis isolate NRS6127]
GTGCAGCAGCATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAAAGGGACAGTCAACACAGTCATCTATCATAA
TGACACCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCCATTGAAGATAAAGCCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAGATCGTAACTCATCCAAAATTCGGGCTC
CAATTTCAGGCGGAGCATTTCAAAAAGGAGATTCCAACGACTAAGGAAGGCATCATTCAATATTTATCGAGTGATTTATT
CGAGGGGATCGGCAAAAAAACAGCTGAAGAAATTGTGAAAAAGCTGGGCGACAGCGCCATTAATAAAATATTGGCTGACG
CTTCAGTGCTTTATGATGTTCCCAGACTCTCAAAAAAGAAAGCCGACACGCTGGCTGGCGCATTGCAGCGGCATCAGGGA
CTGGAGCAAATCATGATTTCCTTGAATCAGTTTGGTTTTGGCCCGCAGCTGTCTATGAAAATCTATCAAGCCTATGAATC
TGAGACGCTTGAAAAGATTCAGGAAAATCCTTATCAGCTTGTGAAGGATGTAGAAGGCATCGGGTTTGGGAAAGCGGATG
AGCTGGGCAGCAGAATGGGTCTTTCGGGTAACCATCCTGAGCGGGTAAAAGCTGCTATTTTGTACACGCTTGAAACGACT
TGTCTGTCAGAGGGGCACACGTACATAGAAACGGAACAGCTGATCATTGACACCCAATCTCTGTTAAACCAGTCAGCAAG
GGAAGGGCAGCGCATCACAGAAATGGATGCCGCTAACGCGATTATTGCCCTTGGAGAAAATAAAGACATTGTCATAGAAG
ATGGCCGCTGTTATTTTCCTTCGCTGTTTTACGCAGAACAAAACGTTGCAAAGCGTGTGAAACATATCGCTAGCCAAACC
GAATATGAGAACCAGTTTCCCGAATCAGAGTTTTTGCTCGCGTTGGGAGAACTGGAAGAACGGATGAACGTTCAGTATGC
CCCCAGCCAGAAGGAAGCGATTCAAAAAGCCCTTTCCTCGCCGATGCTTCTTTTAACAGGCGGTCCGGGAACAGGGAAAA
CGACGGTAATCAGAGGGATTGTCGAGCTCTACGGAGAGCTTCACGGTGTGTCACTAGATCCGTCAGCTTATAAAAAGGAT
GAAGCTTTTCCGATTGTTTTGGCCGCTCCGACAGGGAGAGCAGCAAAACGGATGAGTGAATCAACGGGACTTCCTGCAGT
TACGATACACAGGCTGCTTGGCTGGAACGGTGCTGAAGGCTTTACTCATACAGAGGATCAGCCGATCGAAGGGAAGCTGT
TAATTATCGATGAAGCCAGTATGCTTGATATATGGCTGGCGAATCATTTGTTCAAGGCGATCCCTGATCATATACAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGTCCGGGACAAGTGCTCAGAGACCTGCTGGCATCCCAGGTGAT
TCCGACTGTGAGACTGACAGACATCTATCGCCAGGCAGAAGGGTCATCAATCGTCGAGCTTGCCCACCAGATGAAAAATG
GATTGCTGCCGAACAATTTGACTGCCCCGACAAAGGACCGTTCCTTTATTCGCTGCGGCGGGTCGCAAATCAAAGAAGTA
GTTGAGAAGGTTGTCGCCAATGCATTGAAAAAAGGCTATACAGCAAAGGACATTCAGGTCCTCGCTCCGATGTACAGAGG
AAAAGCCGGCATTAATGAATTGAATGTGATGCTGCAGGACATTTTAAATCCTCCTAAAGAAAAACGGAGAGAATTGAAGT
TCGGGGATGTTGTCTACAGAACCGGAGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTCAACGGAGAT
ATTGGCGAAATCACGTCGATATTTTATGCAAAGGAAAATACAGAAAAAGAAGACATGGCCGTCGTTTCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGATTTTAATCAATTTACCCATGCGTATTGCTGTTCTATTCATAAATCGCAGGGAAGTG
AATTTCCGATTGTGGTTTTGCCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATACCGCGATTACA
AGAGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAGGCGCTGGAGTGGGGCGTGAAAAATAATGATGCAACTGTCAG
ACAGACCTCCTTAAAAAACAGGCTGTCCGTACAGGTTGAGGAAATGGATGCCGAGCTTGAGGCTCTCCAAAAAGAGCTCC
CGTTCAGCGTACACGACGCCAACATTGGCATGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

• AAA domain (AAA_30) (346-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	99.875	100	0.999