Detailed information NTG1156830

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: KJP68_RS08700
• Genome accession: NZ_OX419559
• Coordinates: 1668403..1669182 (+)
• Length: 259 a.a.
• NCBI ID: WP_003220850.1
• Uniprot ID: G4NSM6
• Organism: Bacillus subtilis isolate NRS6099
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1663403..1674182

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP68_RS08680 (NRS6099_08625)	trmFO	1664096..1665403 (+)	1308	WP_003244725.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
KJP68_RS08685 (NRS6099_08630)	xerC	1665471..1666385 (+)	915	WP_003231988.1	tyrosine recombinase XerC	-
KJP68_RS08690 (NRS6099_08635)	clpQ	1666398..1666943 (+)	546	WP_003238555.1	ATP-dependent protease subunit ClpQ	-
KJP68_RS08695 (NRS6099_08640)	hslU	1666951..1668363 (+)	1413	WP_256683486.1	HslU--HslV peptidase ATPase subunit	-
KJP68_RS08700 (NRS6099_08645)	codY	1668403..1669182 (+)	780	WP_003220850.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
KJP68_RS08705 (NRS6099_08650)	flgB	1669562..1669951 (+)	390	WP_029726489.1	flagellar basal body rod protein FlgB	-
KJP68_RS08710 (NRS6099_08655)	flgC	1669951..1670403 (+)	453	WP_003245521.1	flagellar basal body rod protein FlgC	-
KJP68_RS08715 (NRS6099_08660)	fliE	1670414..1670734 (+)	321	WP_003238544.1	flagellar hook-basal body complex protein FliE	-
KJP68_RS08720 (NRS6099_08665)	fliF	1670780..1672390 (+)	1611	WP_010886506.1	flagellar basal-body MS-ring/collar protein FliF	-
KJP68_RS08725 (NRS6099_08670)	fliG	1672403..1673419 (+)	1017	WP_003231981.1	flagellar motor switch protein FliG	-
KJP68_RS08730 (NRS6099_08675)	fliH	1673412..1674164 (+)	753	WP_003244804.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29013.22 Da
• Isoelectric Point: 4.6514

>NTDB_id=1156830 KJP68_RS08700 WP_003220850.1 1668403..1669182(+) (codY) [Bacillus subtilis isolate NRS6099]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTKNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=1156830 KJP68_RS08700 WP_003220850.1 1668403..1669182(+) (codY) [Bacillus subtilis isolate NRS6099]
ATGGCTTTATTACAAAAAACAAGAATTATTAACTCCATGCTGCAAGCTGCGGCAGGGAAACCGGTAAACTTCAAGGAAAT
GGCGGAGACGCTGCGGGATGTAATTGATTCCAATATTTTCGTTGTAAGCCGCAGAGGGAAACTCCTTGGGTATTCTATTA
ACCAGCAAATTGAAAATGATCGTATGAAAAAAATGCTTGAGGATCGTCAATTCCCTGAAGAATATACGAAAAATCTGTTT
AATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCA
AGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCACGTTTACAAGATC
AATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAA
GAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAGCAAT
TGAGCACATTTTTGAGGAGCTTGACGGAAACGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTAGGCATTACCC
GTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGGTGTTATCGAGTCTAGATCATTAGGAATGAAAGGTACT
TATATCAAGGTACTAAACAACAAATTCCTAATTGAATTAGAAAATCTAAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

3D structure

• AlphaFold DB: G4NSM6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	100	100	1
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.451	98.456	0.467