Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | KJP69_RS12460 | Genome accession | NZ_OX419550 |
| Coordinates | 2421292..2422329 (-) | Length | 345 a.a. |
| NCBI ID | WP_029726718.1 | Uniprot ID | - |
| Organism | Bacillus subtilis isolate NRS6187 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2416292..2427329
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP69_RS12410 (NRS6187_12320) | tasA | 2416389..2417174 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| KJP69_RS12415 (NRS6187_12325) | sipW | 2417238..2417810 (-) | 573 | WP_072692741.1 | signal peptidase I | - |
| KJP69_RS12420 (NRS6187_12330) | tapA | 2417794..2418555 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| KJP69_RS12425 (NRS6187_12335) | yqzG | 2418827..2419153 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| KJP69_RS12430 (NRS6187_12340) | spoIIT | 2419195..2419374 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| KJP69_RS12435 (NRS6187_12345) | comGG | 2419446..2419820 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| KJP69_RS12440 | comGF | 2419821..2420204 (-) | 384 | WP_029726721.1 | ComG operon protein ComGF | Machinery gene |
| KJP69_RS12445 (NRS6187_12355) | comGE | 2420230..2420577 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| KJP69_RS12450 (NRS6187_12360) | comGD | 2420561..2420992 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| KJP69_RS12455 (NRS6187_12365) | comGC | 2420982..2421278 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
| KJP69_RS12460 (NRS6187_12370) | comGB | 2421292..2422329 (-) | 1038 | WP_029726718.1 | comG operon protein ComGB | Machinery gene |
| KJP69_RS12465 (NRS6187_12375) | comGA | 2422316..2423386 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| KJP69_RS12470 (NRS6187_12385) | - | 2423599..2423796 (-) | 198 | WP_029726717.1 | hypothetical protein | - |
| KJP69_RS12475 (NRS6187_12390) | corA | 2423798..2424751 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| KJP69_RS12480 (NRS6187_12395) | yqhB | 2424894..2426222 (+) | 1329 | WP_029726716.1 | hemolysin family protein | - |
| KJP69_RS12485 (NRS6187_12400) | rsbRD | 2426275..2427111 (-) | 837 | WP_003230149.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39702.10 Da Isoelectric Point: 9.6257
>NTDB_id=1156360 KJP69_RS12460 WP_029726718.1 2421292..2422329(-) (comGB) [Bacillus subtilis isolate NRS6187]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDILFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDILFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1156360 KJP69_RS12460 WP_029726718.1 2421292..2422329(-) (comGB) [Bacillus subtilis isolate NRS6187]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATACTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATACTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |