Detailed information NTG1155400

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: QNH78_RS00765
• Genome accession: NZ_OX352831
• Coordinates: 118436..119389 (+)
• Length: 317 a.a.
• NCBI ID: WP_024406069.1
• Uniprot ID: -
• Organism: Streptococcus suis isolate 861160_dxerD_hsdSE
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 113436..124389

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH78_RS00725	-	113706..114649 (-)	944	Protein_108	S66 peptidase family protein	-
QNH78_RS00730	comYA	114735..115685 (+)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
QNH78_RS00735	comYB	115597..116634 (+)	1038	WP_255304289.1	competence type IV pilus assembly protein ComGB	Machinery gene
QNH78_RS00740	comYC	116636..116917 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
QNH78_RS00745	comGD	116898..117305 (+)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	-
QNH78_RS00750	comYE	117277..117570 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
QNH78_RS00755	comGF/cglF	117557..117991 (+)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
QNH78_RS00760	comGG	117969..118379 (+)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
QNH78_RS00765	comYH	118436..119389 (+)	954	WP_024406069.1	class I SAM-dependent methyltransferase	Machinery gene
QNH78_RS00770	-	119439..120626 (+)	1188	WP_012775473.1	acetate kinase	-
QNH78_RS00775	-	120940..121491 (+)	552	WP_012775474.1	folate family ECF transporter S component	-
QNH78_RS00780	-	121547..122803 (+)	1257	WP_012775475.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
QNH78_RS00785	pepA	122848..123909 (-)	1062	WP_012775476.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35746.90 Da
• Isoelectric Point: 4.5177

>NTDB_id=1155400 QNH78_RS00765 WP_024406069.1 118436..119389(+) (comYH) [Streptococcus suis isolate 861160_dxerD_hsdSE]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNATYVAGQHETDLVVKNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPKEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI

Nucleotide

• Length: 954 bp

>NTDB_id=1155400 QNH78_RS00765 WP_024406069.1 118436..119389(+) (comYH) [Streptococcus suis isolate 861160_dxerD_hsdSE]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTACTTACGTAGCTGGTCAGCATGAGACGGATCTTGTTGTCAAAAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAGCCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTATTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTCTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGTCCAAAGGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTGAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTGCAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (68-283)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	60.443	99.685	0.603
comYH	Streptococcus mutans UA159	60.127	99.685	0.599