Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   MMH06_RS04590 Genome accession   NZ_OV904788
Coordinates   873924..874745 (+) Length   273 a.a.
NCBI ID   WP_000601671.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain RMV7 isolate RMV7domi     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 868924..879745
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MMH06_RS04565 (IONPJBJN_00896) - 869278..869886 (+) 609 WP_000083614.1 hypothetical protein -
  MMH06_RS04570 (IONPJBJN_00897) - 869879..870289 (+) 411 WP_000595763.1 hypothetical protein -
  MMH06_RS04575 (IONPJBJN_00898) ply 870300..871715 (+) 1416 WP_001284361.1 cholesterol-dependent cytolysin pneumolysin -
  MMH06_RS04580 (IONPJBJN_00899) - 872596..873312 (+) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  MMH06_RS04585 (IONPJBJN_00900) - 873436..873907 (+) 472 Protein_883 MarR family winged helix-turn-helix transcriptional regulator -
  MMH06_RS04590 (IONPJBJN_00901) rcrP 873924..874745 (+) 822 WP_000601671.1 ABC transporter permease Regulator
  MMH06_RS04595 (IONPJBJN_00902) rcrQ 874800..875783 (+) 984 WP_277769896.1 ATP-binding cassette domain-containing protein Regulator
  MMH06_RS04600 (IONPJBJN_00903) - 875849..876211 (+) 363 WP_000078804.1 DUF2200 family protein -
  MMH06_RS04605 (IONPJBJN_00904) - 876208..876711 (+) 504 WP_000800942.1 phosphatase PAP2 family protein -
  MMH06_RS04610 (IONPJBJN_00905) - 876825..877271 (+) 447 WP_000776589.1 LytTR family DNA-binding domain-containing protein -
  MMH06_RS04615 (IONPJBJN_00906) - 877276..877950 (+) 675 WP_000725707.1 hypothetical protein -
  MMH06_RS11000 - 878193..878390 (+) 198 Protein_890 N-acetylmuramoyl-L-alanine amidase family protein -
  MMH06_RS10910 - 878415..878546 (-) 132 WP_001811306.1 hypothetical protein -
  MMH06_RS04630 (IONPJBJN_00907) - 878640..878939 (+) 300 WP_001815024.1 DUF4651 domain-containing protein -
  MMH06_RS04635 (IONPJBJN_00908) - 878936..879253 (+) 318 WP_000615767.1 thioredoxin family protein -

Sequence


Protein


Download         Length: 273 a.a.        Molecular weight: 30652.35 Da        Isoelectric Point: 5.9310

>NTDB_id=1152100 MMH06_RS04590 WP_000601671.1 873924..874745(+) (rcrP) [Streptococcus pneumoniae strain RMV7 isolate RMV7domi]
MILLAILFTCFLVYLELEVPTYISKITDLLGSQETNLDELWQPASMMMGMSFLAFLSVVAVGFFASRVAASYISRLRSDI
FNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGPIMAIWAIGKILGHSEYWLWAVLVVVIVNVLMTTV
LMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEDYQNEKFAAVNDELTRLNLFVNRLMAILNPIMMGISSGLSV
AIYWIGAYVINDAAPIARLPLFSDMIIFMSYAM

Nucleotide


Download         Length: 822 bp        

>NTDB_id=1152100 MMH06_RS04590 WP_000601671.1 873924..874745(+) (rcrP) [Streptococcus pneumoniae strain RMV7 isolate RMV7domi]
ATGATTTTACTAGCCATTCTCTTTACTTGCTTTTTGGTCTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTAC
GGATTTGCTAGGTAGTCAAGAAACTAATTTAGATGAGTTGTGGCAGCCGGCAAGCATGATGATGGGAATGTCCTTTCTTG
CCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCCCGAGTGGCGGCTTCTTATATTAGTAGGCTGAGAAGTGATATT
TTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAAGAAATTTTCAATTCCTAGCCTCTTGACGCGTACTACCAATGA
CATTACTCAAGTTCAAATGTTGATTACTATGGGCTTGCAAGTGGTAACGCGTGGTCCAATTATGGCTATCTGGGCTATTG
GGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCCGTACTTGTGGTAGTGATTGTCAACGTCCTGATGACGACCGTT
TTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCAGGGGTTGACAGATAAACTGAACAGTATCACTCGTGAGAGTTT
AACAGGTATTCGTGTCGTTCGTGCCTACAATGCAGAGGATTATCAAAATGAAAAATTTGCAGCAGTAAATGATGAATTGA
CCCGTTTGAATTTGTTTGTCAACCGTCTTATGGCTATTTTGAATCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTA
GCGATTTACTGGATTGGGGCCTATGTGATTAACGACGCTGCTCCGATAGCGCGTCTGCCTCTCTTTAGTGACATGATTAT
TTTCATGTCTTATGCCATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

56.842

100

0.593


Multiple sequence alignment