Detailed information NTG1151706

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: M7777_RS07945
• Genome accession: NZ_OV024757
• Coordinates: 1542875..1544143 (+)
• Length: 422 a.a.
• NCBI ID: WP_227086002.1
• Uniprot ID: -
• Organism: Deinococcus radiodurans isolate DRR11
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1537875..1549143

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M7777_RS07930	-	1538641..1539357 (+)	717	WP_010887417.1	hypothetical protein	-
M7777_RS07935	pilO	1539354..1540013 (+)	660	WP_010887418.1	type II secretion system protein M	-
M7777_RS07940	-	1540010..1541917 (+)	1908	WP_010887419.1	hypothetical protein	-
M7777_RS07945	pilQ	1542875..1544143 (+)	1269	WP_227086002.1	secretin N-terminal domain-containing protein	Machinery gene
M7777_RS07950	aroC	1544407..1545555 (+)	1149	WP_010887421.1	chorismate synthase	-
M7777_RS07955	-	1545689..1546279 (+)	591	WP_034350371.1	shikimate kinase	-
M7777_RS07960	aroB	1546266..1547318 (+)	1053	WP_010887423.1	3-dehydroquinate synthase	-
M7777_RS07965	aroQ	1547467..1547898 (+)	432	WP_010887424.1	type II 3-dehydroquinate dehydratase	-
M7777_RS07970	-	1547895..1548872 (+)	978	WP_027479984.1	alpha/beta hydrolase	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 44190.66 Da
• Isoelectric Point: 5.4747

>NTDB_id=1151706 M7777_RS07945 WP_227086002.1 1542875..1544143(+) (pilQ) [Deinococcus radiodurans isolate DRR11]
MQRIYTVRGQAADITALLAAQYPTLRVTPVGQTGQLVLNGAQAQLDTALALLEQVDRPAPVAESRTVQRVFQLVNASAEE
VKATLEGTLARDLTADSNNDVLPNVPVTATDANGNTTVVSVPNALGKTANQGTANAQAQTAQTPANTQQATLIADKRTNS
LIVRGTPEQVAQVAELVPQLDQVVPQINVQVRIQEVNERALQSLGLNWRATFGGFNVAVSGGTGLAATFNPTQSFLGFNI
FPTLTALETQGLTRRVYDGNVTMQSGQRSLSATGGAQNASSGAAASVKSGGRLEINIPSAAGNIVRQIDYGLNLDFFSPQ
VAPDGTITLRIRGQVNQPATAITADSLPNLIDFTNSEAQSTITFKNGQTILMSGLLGSTETTNRSGVPFLSSLPGVGAAF
GEKRTEKTQSQLLVIITGTVVK

Nucleotide

• Length: 1269 bp

>NTDB_id=1151706 M7777_RS07945 WP_227086002.1 1542875..1544143(+) (pilQ) [Deinococcus radiodurans isolate DRR11]
GTGCAGCGCATCTACACCGTGCGCGGCCAGGCCGCCGACATCACGGCGCTGCTCGCTGCCCAGTACCCTACCCTGCGCGT
GACCCCGGTGGGGCAGACCGGCCAACTGGTGCTCAACGGCGCTCAGGCCCAGCTCGACACGGCGCTCGCCCTGCTCGAAC
AGGTGGACCGCCCCGCCCCGGTGGCCGAGTCCCGTACCGTTCAGCGCGTCTTCCAGCTCGTCAACGCCAGCGCTGAGGAA
GTCAAGGCGACCCTGGAAGGCACCCTGGCGCGTGACCTGACCGCCGACAGCAATAACGACGTGCTGCCCAACGTGCCCGT
CACCGCCACCGACGCCAACGGCAACACGACCGTGGTGAGCGTGCCCAACGCGCTCGGCAAGACGGCGAACCAGGGCACGG
CGAATGCTCAGGCTCAGACTGCCCAGACTCCGGCCAACACCCAGCAGGCGACCCTGATCGCCGACAAGCGCACCAACAGC
CTGATCGTGCGCGGCACGCCCGAACAGGTGGCGCAGGTGGCCGAGCTGGTGCCGCAGCTCGATCAGGTGGTGCCGCAGAT
CAACGTGCAGGTGCGGATTCAGGAGGTCAACGAGCGAGCGCTGCAATCGCTGGGCCTCAACTGGCGGGCGACCTTCGGTG
GCTTCAACGTGGCGGTCTCGGGCGGCACCGGGCTGGCGGCCACCTTCAACCCCACCCAGAGCTTCCTCGGTTTCAACATT
TTCCCGACCCTCACGGCGCTCGAAACCCAGGGCCTGACCCGGCGCGTGTACGACGGCAACGTGACCATGCAAAGCGGCCA
GCGCTCGCTGAGTGCCACGGGCGGCGCCCAGAACGCTTCGAGCGGCGCGGCGGCCAGCGTCAAGAGTGGGGGCCGACTGG
AAATCAACATCCCCTCGGCGGCGGGCAACATCGTGCGGCAGATCGATTACGGTCTCAACCTCGATTTCTTCAGCCCGCAG
GTGGCGCCCGACGGCACCATCACCCTGCGTATTCGCGGTCAGGTCAACCAGCCGGCAACGGCGATCACCGCCGACAGCCT
GCCCAACCTCATCGACTTCACCAACAGCGAAGCGCAAAGCACCATCACCTTCAAGAACGGCCAGACCATCCTGATGAGCG
GCCTGCTCGGCAGCACCGAGACCACCAACCGCAGCGGCGTGCCCTTCCTGAGCAGCCTGCCCGGTGTGGGCGCGGCCTTC
GGGGAAAAACGCACCGAGAAGACCCAGTCGCAACTGCTCGTCATCATCACCGGCACCGTCGTCAAATAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (279-422)

• Bacterial type II/III secretion system short domain (Secretin_N) (69-185)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	100	100	1