Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | DXE58_RS13040 | Genome accession | NZ_LT992456 |
| Coordinates | 2517457..2517756 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus isolate 1_1439 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2512457..2522756
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXE58_RS13000 | - | 2512518..2512721 (+) | 204 | WP_000087559.1 | YqgQ family protein | - |
| DXE58_RS13005 | - | 2512718..2513704 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| DXE58_RS13010 | - | 2513704..2514033 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| DXE58_RS13015 | - | 2514030..2514653 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| DXE58_RS13020 | comGA | 2514705..2515679 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DXE58_RS13025 | comGB | 2515651..2516721 (+) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DXE58_RS13030 | comGC | 2516735..2517046 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DXE58_RS13035 | comGD | 2517024..2517470 (+) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DXE58_RS13040 | comGE | 2517457..2517756 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| DXE58_RS13045 | comGF | 2517674..2518171 (+) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DXE58_RS13050 | - | 2518268..2518414 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| DXE58_RS13055 | - | 2518404..2518928 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| DXE58_RS13060 | gcvT | 2519087..2520178 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| DXE58_RS13065 | gcvPA | 2520198..2521544 (+) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1149307 DXE58_RS13040 WP_000844413.1 2517457..2517756(+) (comGE) [Staphylococcus aureus isolate 1_1439]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1149307 DXE58_RS13040 WP_000844413.1 2517457..2517756(+) (comGE) [Staphylococcus aureus isolate 1_1439]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |