Detailed information NTG1148349

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: LSAF01_RS02635
• Genome accession: NZ_LT960777
• Coordinates: 528796..529491 (+)
• Length: 231 a.a.
• NCBI ID: WP_147658291.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain FLEC01
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 523796..534491

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSAF01_RS02615 (LSAF01_0520)	rny	523924..525489 (+)	1566	WP_056948843.1	ribonuclease Y	-
LSAF01_RS02620 (LSAF01_0521)	-	525642..526730 (+)	1089	WP_056948881.1	glycosyltransferase family 4 protein	-
LSAF01_RS02625 (LSAF01_0522)	-	526756..527421 (-)	666	WP_056948841.1	YigZ family protein	-
LSAF01_RS02630 (LSAF01_0523)	comFA	527483..528820 (+)	1338	WP_056948838.1	DEAD/DEAH box helicase	Machinery gene
LSAF01_RS02635 (LSAF01_0524)	comFC	528796..529491 (+)	696	WP_147658291.1	ComF family protein	Machinery gene
LSAF01_RS02640 (LSAF01_0525)	hpf	529618..530163 (+)	546	WP_056948836.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
LSAF01_RS02645 (LSAF01_0526)	secA	530412..532775 (+)	2364	WP_011374203.1	preprotein translocase subunit SecA	-
LSAF01_RS02650 (LSAF01_0527)	prfB	532845..533961 (+)	1117	WP_099947623.1	peptide chain release factor 2	-

Sequence

Protein

• Length: 231 a.a.
• Molecular weight: 26933.39 Da
• Isoelectric Point: 9.4488

>NTDB_id=1148349 LSAF01_RS02635 WP_147658291.1 528796..529491(+) (comFC) [Latilactobacillus sakei strain FLEC01]
MAITINCLMCQNVIIEKPSIKQLLQLKPLLKPHICQICLQQFEPISGNQCSDCSRPLLTGILCSDCQHWRQLYPQQHFKN
QALFTYNRAMQLYFQRYKGQGDYQLRLLFERDIQTRFPVKPNVAYVPIPSDEQHQQARGFNPVQGLFENCFPLMSLLKKR
PTEKGQAQKNRAERLASPQFFELIPQKLPDKLQSITILDDIYTTGRTLWHAQQCLRARYPQITINAITLAR

Nucleotide

• Length: 696 bp

>NTDB_id=1148349 LSAF01_RS02635 WP_147658291.1 528796..529491(+) (comFC) [Latilactobacillus sakei strain FLEC01]
ATGGCGATTACAATCAACTGTTTAATGTGTCAAAATGTCATTATTGAAAAGCCAAGTATTAAACAACTGCTACAACTAAA
ACCACTACTTAAACCGCATATCTGTCAAATTTGTTTACAGCAGTTTGAACCTATCAGTGGCAACCAGTGTTCGGATTGTA
GTCGGCCACTATTGACGGGCATTTTATGTTCTGATTGTCAGCATTGGCGACAACTTTACCCCCAACAGCATTTTAAAAAT
CAAGCATTGTTTACTTATAATCGGGCGATGCAGTTATATTTTCAACGTTATAAGGGCCAAGGAGATTATCAATTACGGTT
ACTATTTGAACGGGACATTCAAACGCGGTTTCCAGTAAAGCCCAATGTAGCTTACGTGCCGATCCCATCCGATGAGCAAC
ATCAACAAGCACGCGGTTTTAATCCAGTCCAAGGCTTATTCGAAAATTGTTTTCCGCTAATGTCACTCTTGAAAAAGCGA
CCAACGGAAAAGGGGCAAGCGCAAAAAAATCGTGCAGAACGACTCGCAAGTCCGCAATTTTTTGAATTAATACCACAAAA
GTTACCTGATAAGCTACAGTCGATAACGATTCTAGATGATATTTACACGACCGGTCGAACGTTGTGGCATGCTCAGCAAT
GTCTGCGTGCTCGTTATCCGCAAATTACAATTAATGCAATTACTTTGGCCAGATAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Latilactobacillus sakei subsp. sakei 23K	91.549	61.472	0.563