Detailed information NTG1147794

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: CKV92_RS07525
• Genome accession: NZ_LT906466
• Coordinates: 1518451..1520844 (-)
• Length: 797 a.a.
• NCBI ID: WP_025279948.1
• Uniprot ID: -
• Organism: Listeria ivanovii subsp. ivanovii strain NCTC11007
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1513451..1525844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKV92_RS07505 (SAMEA4475701_01537)	-	1513911..1514606 (-)	696	WP_014092868.1	ABC transporter ATP-binding protein	-
CKV92_RS07510 (SAMEA4475701_01538)	-	1514615..1516123 (-)	1509	WP_014092869.1	ABC transporter permease	-
CKV92_RS07515 (SAMEA4475701_01539)	pieR	1516290..1516976 (+)	687	WP_014092870.1	two component system response regulator PieR	-
CKV92_RS07520 (SAMEA4475701_01540)	pieS	1516973..1518412 (+)	1440	WP_014092871.1	two component system sensor histidine kinase PieS	-
CKV92_RS07525 (SAMEA4475701_01541)	recD2	1518451..1520844 (-)	2394	WP_025279948.1	ATP-dependent RecD-like DNA helicase	Machinery gene
CKV92_RS07530 (SAMEA4475701_01542)	-	1520870..1521508 (-)	639	WP_014092873.1	tetratricopeptide repeat protein	-
CKV92_RS07535 (SAMEA4475701_01543)	-	1521551..1522291 (-)	741	WP_014092874.1	alpha/beta hydrolase	-
CKV92_RS07540 (SAMEA4475701_01544)	mnmA	1522410..1523525 (-)	1116	WP_014092875.1	tRNA 2-thiouridine(34) synthase MnmA	-
CKV92_RS07545 (SAMEA4475701_01545)	-	1523544..1524692 (-)	1149	WP_014092876.1	cysteine desulfurase family protein	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 90115.36 Da
• Isoelectric Point: 4.9786

>NTDB_id=1147794 CKV92_RS07525 WP_025279948.1 1518451..1520844(-) (recD2) [Listeria ivanovii subsp. ivanovii strain NCTC11007]
MAEQESLALFDTPEELFMKGTMLSTIFYNAENLFSVVRILVKETNADWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAKF
GQQFKAERFRKEMPQSRAGLINYLSGELFKGIGKVTAENIVDTIGDDAITRILSDPSLLNNVPKLPSGAAESLLASLREN
QGLEHVMVGLNEYGFGPQLSMKIFQAYKQNAIEVLENNPYKLIEDVKGIGFHRADELGRKLGLGGNHPERLRAGILFMLD
SVCMQQGHVYMEQEALLAEVTFLLEESEGIRIDHAILMEQIEKLAEEQKIIMENTRVYMPSLYYSESGFAYHVKRMLKQT
QYQEQFPQSEFLLALGELEERIGVHYGDSQREALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKDG
ATFPVLLAAPTGRAAKRMSESTGLPSMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPSHMQV
VLVGDQDQLPSVGPGQVLKDILHSKQIPTVALSDIYRQKDGSSIIEMAHNIKEGMLPADFAKNSADRSFFHCTVNQIGDV
VEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGELKYRIHDKVLQLINQPEKNVFNG
DIGEIVSIIYAKENTEKQDMIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTGV
TRSKQFLILCGEEEAFRMGVERVDENKRNTTLSERLISEDVMLEQMTNKRILTIENITEIDPMIGMEGITPNQFMAG

Nucleotide

• Length: 2394 bp

>NTDB_id=1147794 CKV92_RS07525 WP_025279948.1 1518451..1520844(-) (recD2) [Listeria ivanovii subsp. ivanovii strain NCTC11007]
ATGGCTGAACAAGAATCTCTCGCTTTATTTGACACGCCAGAAGAGCTTTTTATGAAGGGCACGATGTTGTCCACCATTTT
TTATAATGCCGAAAACCTCTTTTCTGTTGTGCGAATTCTTGTCAAAGAAACCAATGCAGATTGGGATGAAAAAGATATTA
TTGTGACTGGTTTTTTCCCCGCTTTACATGAACAAGAAGTGTATACTTTTTATGGGAAAATGCAGGAACATGCCAAATTT
GGACAGCAATTTAAAGCAGAACGTTTTAGGAAAGAAATGCCGCAATCTCGTGCTGGTTTAATTAATTATCTGTCTGGTGA
GCTTTTTAAAGGTATTGGCAAAGTGACTGCGGAAAATATTGTTGATACAATTGGCGACGATGCAATTACGCGGATTTTAT
CTGATCCAAGTTTACTTAATAATGTTCCAAAGTTACCATCTGGTGCTGCGGAGAGCCTCCTTGCTTCTTTACGAGAAAAT
CAAGGCTTAGAGCATGTGATGGTCGGGCTAAATGAATATGGATTTGGTCCACAACTTTCGATGAAGATTTTTCAAGCATA
TAAACAAAATGCTATCGAAGTACTTGAAAACAATCCATACAAATTAATTGAGGATGTCAAAGGTATTGGATTTCACCGAG
CGGATGAGCTTGGTCGGAAATTAGGACTAGGAGGAAATCATCCTGAACGCCTTCGTGCGGGAATTTTATTTATGCTTGAT
TCTGTATGCATGCAACAAGGCCATGTTTATATGGAACAAGAAGCGCTACTTGCAGAAGTGACCTTTTTGCTAGAAGAAAG
TGAAGGTATTCGAATTGATCATGCTATTTTAATGGAACAAATAGAAAAGCTTGCTGAAGAACAAAAAATTATCATGGAAA
ACACACGTGTCTATATGCCATCTTTATATTATTCGGAAAGCGGCTTTGCTTATCATGTAAAACGGATGCTGAAACAAACA
CAGTATCAAGAGCAATTTCCGCAGTCTGAGTTCTTGCTGGCACTTGGAGAGTTAGAAGAGCGAATTGGTGTTCATTACGG
AGATTCGCAGCGAGAGGCGTTAGAGCAAGCTTTAATGTCGCCGATGCTTGTACTTACTGGTGGACCAGGAACAGGGAAGA
CTACTGTTATTAAAGGTATTGTGGAATTATATGCCGAATTAAATGGTGTAAGTCTAGACCCGCATGCTTATAAAGATGGC
GCGACGTTTCCAGTTCTGTTAGCGGCACCAACTGGACGAGCAGCTAAGCGAATGTCTGAGTCAACAGGACTTCCATCAAT
GACCATTCACCGTTTACTCGGTATGAATGGGCAAGAGCAAATGGATGATGATGCAGAAAGATTAATTGATGGTCGGCTTT
TAATTGTAGATGAAATGTCGATGGTGGATATTTGGCTTGCTAACCAACTATTTCGTGCACTTCCTTCGCATATGCAAGTA
GTTTTAGTAGGAGACCAAGACCAATTGCCATCAGTTGGACCAGGACAGGTCTTGAAAGATATACTTCACTCGAAACAAAT
TCCAACCGTTGCGCTTTCAGATATTTATAGGCAAAAAGATGGATCTTCCATTATTGAGATGGCTCATAATATTAAAGAAG
GCATGTTGCCAGCTGATTTTGCGAAAAATAGTGCTGATCGTTCTTTCTTTCACTGTACCGTGAATCAAATTGGTGATGTC
GTTGAACAAGTCGTAAAAAATGCCAAAAATAAAGGTTTCCGCGCAAAAGATATTCAAGTTTTAGCACCGATGTATCGTGG
CCCGGCTGGAATCGATATTTTAAATAAAAAGCTACAAGAAATTTTTAATCCTAATGACACTGGCAGACGTAAAGAAGTGC
AATTTGGCGAATTAAAATATCGTATACATGATAAAGTTTTGCAGTTAATAAATCAACCGGAAAAAAATGTCTTTAACGGC
GATATCGGGGAAATAGTATCGATTATTTATGCGAAGGAAAACACCGAAAAGCAAGATATGATTGTTGTGCAATTTGATCA
AACCGAAGTATCCTATTACCGGCAAGAATTTAATCAATTGACGCATGCTTATTGTTGTTCTATTCATAAAGCACAAGGTA
GCGAGTTTCCCATTGTGATTATGCCAATTGTTCGTAGCTATTACCGAATGTTACGACGTGACTTGTTATATACGGGTGTC
ACTCGAAGCAAGCAATTTTTGATTCTTTGCGGTGAAGAAGAGGCGTTTCGAATGGGTGTTGAGCGTGTCGATGAAAACAA
ACGTAATACGACGCTTTCAGAACGTTTAATAAGTGAAGATGTTATGCTCGAACAAATGACCAATAAACGAATTTTAACTA
TCGAAAATATTACCGAAATAGATCCGATGATTGGGATGGAAGGAATAACCCCCAACCAATTTATGGCAGGCTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (159-250)

• AAA domain (AAA_30) (346-553)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-665)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-730)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	57.36	98.871	0.567