Detailed information NTG0114776

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: QU35_RS14245
• Genome accession: NZ_CP010052
• Coordinates: 2812348..2813613 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis subsp. subtilis str. 168
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2807348..2818613

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QU35_RS14225 (QU35_14955)	yrrB	2808719..2809339 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
QU35_RS14230 (QU35_14960)	mnmA	2809425..2810540 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
QU35_RS14235 (QU35_14965)	iscSA	2810571..2811710 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
QU35_RS14240 (QU35_14970)	cymR	2811729..2812145 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
QU35_RS14245 (QU35_14975)	rarA	2812348..2813613 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
QU35_RS14250 (QU35_14980)	tcdA	2813655..2814419 (-)	765	WP_009967893.1	tRNA threonylcarbamoyladenosine dehydratase	-
QU35_RS14255 (QU35_14990)	aspS	2814755..2816533 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
QU35_RS14260 (QU35_14995)	hisS	2816547..2817821 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
QU35_RS22025 (QU35_15000)	yrzK	2818203..2818373 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=114776 QU35_RS14245 WP_004398500.1 2812348..2813613(+) (rarA) [Bacillus subtilis subsp. subtilis str. 168]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=114776 QU35_RS14245 WP_004398500.1 2812348..2813613(+) (rarA) [Bacillus subtilis subsp. subtilis str. 168]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1