Detailed information NTG0114536

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: FORC9_RS08870
• Genome accession: NZ_CP009984
• Coordinates: 1946305..1947654 (-)
• Length: 449 a.a.
• NCBI ID: WP_060532019.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FORC_009
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1941305..1952654

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC9_RS08855 (FORC9_1738)	bioB	1942375..1943427 (-)	1053	WP_011080761.1	biotin synthase BioB	-
FORC9_RS08860 (FORC9_1739)	bioA	1943568..1944845 (+)	1278	WP_060532017.1	adenosylmethionine--8-amino-7-oxononanoate transaminase	-
FORC9_RS08865 (FORC9_1740)	serS	1944906..1946213 (-)	1308	WP_011080763.1	serine--tRNA ligase	-
FORC9_RS08870 (FORC9_1741)	rarA	1946305..1947654 (-)	1350	WP_060532019.1	replication-associated recombination protein A	Machinery gene
FORC9_RS24220 (FORC9_1742)	lolA	1947661..1948257 (-)	597	WP_060532021.1	outer membrane lipoprotein chaperone LolA	-
FORC9_RS08880 (FORC9_1743)	-	1948330..1951287 (-)	2958	WP_060532023.1	DNA translocase FtsK	-
FORC9_RS08885 (FORC9_1744)	lrp	1951432..1951926 (-)	495	WP_011080767.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 49706.02 Da
• Isoelectric Point: 5.6773

>NTDB_id=114536 FORC9_RS08870 WP_060532019.1 1946305..1947654(-) (rarA) [Vibrio vulnificus strain FORC_009]
MSNYTLDFSGDEDFRPLAARMRPETVEQYIGQQHILGPGKPLRRALEAGHIHSMILWGPPGTGKTTLAEVAANYANAEVE
RVSAVTSGVKDIRAAIEKARENKMAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTVTFIGATTENPSFELNNALLSRARV
YKLTSLNKEEISLALNQAINDKQRGLGNTPAHFADNVLDRLAELVNGDARMSLNYLELLYDMAEDNAQGEKEITLKLLAE
VAGEKVSRFDNKGDIWYDLISAVHKSIRGSNPDAALYWSARMIAAGCDPLYIARRLLAIASEDVGNADPRAMQVALSAWD
CFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAWKQALSDAHNLPEFEVPFHLRNAPTGLMKDLGYGEGYRYAHDEPGAY
AAGEQYLPAEIADRKYYQPTNRGLESKIAEKLDYLANLDANSPQKRYEK

Nucleotide

• Length: 1350 bp

>NTDB_id=114536 FORC9_RS08870 WP_060532019.1 1946305..1947654(-) (rarA) [Vibrio vulnificus strain FORC_009]
GTGTCAAATTACACCTTAGATTTTTCAGGGGACGAAGATTTTCGTCCCCTTGCTGCTCGTATGAGACCGGAAACGGTCGA
ACAGTACATCGGTCAGCAGCATATTTTAGGCCCTGGTAAGCCATTACGTCGCGCGCTAGAGGCCGGCCACATTCATTCAA
TGATTCTGTGGGGACCTCCAGGTACAGGCAAGACGACATTAGCGGAAGTAGCCGCAAACTACGCCAATGCGGAAGTTGAA
CGCGTCTCTGCGGTCACGTCCGGCGTGAAAGACATTCGGGCCGCAATTGAAAAAGCACGTGAGAACAAAATGGCGGGTCG
TCGCACCATCTTGTTTGTGGATGAGGTACATCGCTTTAATAAATCACAGCAAGATGCCTTCTTACCGCACATTGAAGATG
GAACAGTGACTTTTATCGGCGCGACCACAGAAAATCCATCGTTTGAACTGAACAACGCATTATTGTCACGTGCTCGTGTG
TATAAGCTTACGTCACTCAACAAAGAAGAAATCTCACTGGCATTAAACCAAGCGATCAACGATAAACAACGTGGTCTGGG
TAATACACCAGCACACTTTGCTGATAATGTCTTGGATCGTCTGGCTGAGCTCGTCAATGGTGATGCGCGAATGTCTCTTA
ACTATCTTGAGCTGCTGTATGACATGGCAGAAGACAATGCTCAGGGTGAAAAAGAGATCACGCTAAAGCTATTGGCGGAA
GTGGCGGGGGAGAAGGTCTCTCGTTTTGATAATAAAGGCGACATTTGGTACGACTTAATCTCTGCCGTGCACAAATCCAT
TCGCGGCTCAAACCCGGACGCTGCGCTTTATTGGTCGGCGAGAATGATCGCTGCCGGTTGTGATCCACTCTATATCGCGC
GACGTTTGCTGGCCATTGCCTCTGAAGATGTGGGCAATGCGGATCCGAGGGCAATGCAAGTGGCACTTTCCGCGTGGGAT
TGCTTTACCCGTGTTGGACCCGCAGAAGGCGAACGCGCAATTGCACAGGCGATCGTTTACCTTGCGTGCGCGCCGAAAAG
TAACGCGGTCTACACCGCTTGGAAGCAAGCGCTGTCGGATGCACATAATCTTCCTGAATTTGAAGTGCCTTTCCATTTGC
GTAATGCACCGACCGGATTGATGAAAGATCTCGGTTATGGAGAAGGTTATCGATACGCTCATGATGAACCAGGGGCCTAC
GCAGCAGGCGAACAATATTTGCCTGCTGAAATTGCTGATCGCAAGTACTATCAGCCAACAAATCGAGGCTTAGAGAGCAA
AATCGCTGAAAAGTTAGATTACTTGGCTAATTTAGACGCAAATAGCCCACAAAAGCGCTATGAAAAGTAG

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (54-159)

• MgsA AAA+ ATPase C terminal (MgsA_C) (269-435)

• AAA C-terminal domain (AAA_assoc_2) (189-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	40.189	94.209	0.379