Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | B5474_RS17260 | Genome accession | NZ_LT605059 |
| Coordinates | 3605301..3605726 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788339.1 | Uniprot ID | A0A009QPU5 |
| Organism | Acinetobacter baumannii strain NCTC7364 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3600301..3610726
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B5474_RS17230 (NCTC7364_03453) | - | 3600829..3601863 (+) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
| B5474_RS17235 (NCTC7364_03454) | - | 3601978..3602919 (+) | 942 | WP_086264203.1 | lipase family alpha/beta hydrolase | - |
| B5474_RS17240 (NCTC7364_03455) | rplS | 3602973..3603341 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| B5474_RS17245 (NCTC7364_03456) | trmD | 3603549..3604289 (-) | 741 | WP_005109350.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| B5474_RS17250 (NCTC7364_03457) | rimM | 3604335..3604883 (-) | 549 | WP_031961380.1 | ribosome maturation factor RimM | - |
| B5474_RS17255 (NCTC7364_03458) | rpsP | 3604903..3605154 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| B5474_RS17260 (NCTC7364_03459) | pilE | 3605301..3605726 (-) | 426 | WP_000788339.1 | type IV pilin protein | Machinery gene |
| B5474_RS17265 (NCTC7364_03460) | pilY2 | 3605723..3606205 (-) | 483 | WP_002010622.1 | type IV pilin protein | Machinery gene |
| B5474_RS17270 (NCTC7364_03461) | pilY1 | 3606218..3610072 (-) | 3855 | WP_079549041.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15210.39 Da Isoelectric Point: 7.8144
>NTDB_id=1145157 B5474_RS17260 WP_000788339.1 3605301..3605726(-) (pilE) [Acinetobacter baumannii strain NCTC7364]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1145157 B5474_RS17260 WP_000788339.1 3605301..3605726(-) (pilE) [Acinetobacter baumannii strain NCTC7364]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
97.872 |
100 |
0.979 |
| comF | Acinetobacter baylyi ADP1 |
51.429 |
99.291 |
0.511 |