Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   CJH_RS06640 Genome accession   NZ_CP006851
Coordinates   1278530..1279045 (-) Length   171 a.a.
NCBI ID   WP_041160206.1    Uniprot ID   A0A5Y8UQV7
Organism   Campylobacter jejuni subsp. jejuni F38011     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1273530..1284045
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJH_RS06625 (CJH_06715) - 1273624..1275366 (-) 1743 WP_041160204.1 flagellin A -
  CJH_RS06630 (CJH_06720) - 1275449..1277275 (-) 1827 WP_041160205.1 motility associated factor glycosyltransferase family protein -
  CJH_RS09200 - 1277272..1278530 (-) 1259 Protein_1283 DUF2920 family protein -
  CJH_RS06640 (CJH_06735) ctsG 1278530..1279045 (-) 516 WP_041160206.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  CJH_RS06645 (CJH_06740) tsaD 1279046..1280053 (-) 1008 WP_041160207.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  CJH_RS06655 (CJH_06745) - 1280050..1281443 (-) 1394 Protein_1286 M99 family carboxypeptidase catalytic domain-containing protein -
  CJH_RS06660 (CJH_06750) dxr 1281445..1282515 (-) 1071 WP_041160209.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  CJH_RS06665 (CJH_06755) cdsA 1282512..1283237 (-) 726 WP_041160210.1 phosphatidate cytidylyltransferase -
  CJH_RS06670 (CJH_06760) - 1283247..1283585 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18692.59 Da        Isoelectric Point: 6.4682

>NTDB_id=114436 CJH_RS06640 WP_041160206.1 1278530..1279045(-) (ctsG) [Campylobacter jejuni subsp. jejuni F38011]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRIGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=114436 CJH_RS06640 WP_041160206.1 1278530..1279045(-) (ctsG) [Campylobacter jejuni subsp. jejuni F38011]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAACGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCATAGGTGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Y8UQV7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936

Multiple sequence alignment