Detailed information NTG1143673

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: BJR96_RS01050
• Genome accession: NZ_LT545678
• Coordinates: 172772..173704 (+)
• Length: 310 a.a.
• NCBI ID: WP_070001323.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae isolate SA111
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 167772..178704

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BJR96_RS01030 (SA111_00195)	-	167984..169639 (+)	1656	WP_017643615.1	peptide ABC transporter substrate-binding protein	-
BJR96_RS01035 (SA111_00196)	-	169758..170672 (+)	915	WP_000598965.1	ABC transporter permease	-
BJR96_RS01040 (SA111_00197)	-	170682..171713 (+)	1032	WP_000764052.1	ABC transporter permease	-
BJR96_RS01045 (SA111_00198)	oppD	171726..172772 (+)	1047	WP_000410290.1	ABC transporter ATP-binding protein	Regulator
BJR96_RS01050 (SA111_00199)	amiF	172772..173704 (+)	933	WP_070001323.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 34833.58 Da
• Isoelectric Point: 6.7314

>NTDB_id=1143673 BJR96_RS01050 WP_070001323.1 172772..173704(+) (amiF) [Streptococcus agalactiae isolate SA111]
MTENRKKLVEVKNVSLTFNKGKANEVRAIDNVSFDIYEGEVFGLVGESGSGKTTVGRSILKLYDISDGEITFNGEVISHL
KGKALHSFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHKLAKSKSDRDSKVQALLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPTSALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGTSDD
VYNNPIHPYTKSLLSAIPEPDPESERQRVHQPYNPAIEQDGQERQMHEITPGHFVLSTSQEAEEYKKQIL

Nucleotide

• Length: 933 bp

>NTDB_id=1143673 BJR96_RS01050 WP_070001323.1 172772..173704(+) (amiF) [Streptococcus agalactiae isolate SA111]
ATGACTGAAAATCGAAAAAAATTAGTTGAAGTCAAAAATGTTTCTTTGACCTTCAATAAAGGAAAAGCTAATGAAGTGAG
AGCAATTGATAATGTTAGTTTTGACATTTATGAAGGTGAAGTGTTTGGATTAGTTGGGGAATCTGGATCAGGAAAGACAA
CCGTTGGACGTTCAATTTTAAAACTTTATGATATTTCTGATGGAGAAATTACCTTTAATGGAGAAGTGATCTCACATCTG
AAAGGTAAAGCATTACATAGTTTTCGTAAAGACGCTCAGATGATTTTTCAGGATCCTCAGGCTAGCTTAAACGGCCGTAT
GAAGATTCGTGATATCGTAGCAGAAGGTTTAGACATACATAAATTAGCTAAATCAAAATCAGATCGTGATAGTAAAGTTC
AGGCCCTATTAGATCTTGTAGGGTTAAATAAAGATCATTTAACACGTTATCCGCATGAATTTTCAGGTGGACAACGACAA
CGTATCGGGATTGCACGTGCTTTAGCAGTAGAGCCTAAATTTATCATTGCTGATGAACCAACATCTGCCTTAGATGTTTC
AATCCAAGCACAAGTTGTTAATTTAATGCAAAAATTGCAAAGAGAACAAGGATTGACTTATTTGTTTATCGCACATGATT
TGTCTATGGTAAAATACATTTCAGATCGTATCGGTGTTATGCATTGGGGGAAACTGTTAGAAGTTGGAACATCTGATGAT
GTTTATAACAATCCAATCCACCCTTATACGAAGAGTCTATTATCAGCTATTCCAGAACCAGATCCGGAGAGTGAACGTCA
ACGTGTTCACCAGCCGTATAATCCAGCTATTGAGCAAGACGGACAAGAACGTCAAATGCACGAGATTACACCTGGTCATT
TTGTTTTATCTACATCCCAAGAAGCTGAAGAATATAAAAAACAAATATTATAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-182)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.221	99.355	0.539
amiF	Streptococcus thermophilus LMG 18311	53.896	99.355	0.535
amiF	Streptococcus salivarius strain HSISS4	54.098	98.387	0.532