Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | DQM71_RS01650 | Genome accession | NZ_LS483472 |
| Coordinates | 350328..350753 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788336.1 | Uniprot ID | A0A0J0ZME6 |
| Organism | Acinetobacter baumannii strain NCTC13421 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 345328..355753
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM71_RS01640 (NCTC13421_00325) | pilY1 | 345984..349838 (+) | 3855 | WP_000768943.1 | VWA domain-containing protein | Machinery gene |
| DQM71_RS01645 (NCTC13421_00326) | pilY2 | 349849..350331 (+) | 483 | WP_001046489.1 | type IV pilin protein | Machinery gene |
| DQM71_RS01650 (NCTC13421_00327) | pilE | 350328..350753 (+) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| DQM71_RS01655 (NCTC13421_00328) | rpsP | 350900..351151 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| DQM71_RS01660 (NCTC13421_00329) | rimM | 351171..351719 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| DQM71_RS01665 (NCTC13421_00330) | trmD | 351765..352505 (+) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| DQM71_RS01670 (NCTC13421_00331) | rplS | 352713..353081 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| DQM71_RS01675 (NCTC13421_00332) | - | 353133..354074 (-) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| DQM71_RS01680 (NCTC13421_00333) | - | 354189..355220 (-) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15175.41 Da Isoelectric Point: 7.8144
>NTDB_id=1142366 DQM71_RS01650 WP_000788336.1 350328..350753(+) (pilE) [Acinetobacter baumannii strain NCTC13421]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1142366 DQM71_RS01650 WP_000788336.1 350328..350753(+) (pilE) [Acinetobacter baumannii strain NCTC13421]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.071 |
100 |
0.901 |
| comF | Acinetobacter baylyi ADP1 |
49.286 |
99.291 |
0.489 |