Detailed information NTG1140568

Bioinformatically predicted

Overview

• Name: rcrQ
• Type: Regulator
• Locus tag: DQN21_RS07085
• Genome accession: NZ_LS483409
• Coordinates: 1393039..1394811 (-)
• Length: 590 a.a.
• NCBI ID: WP_009854392.1
• Uniprot ID: A0A060RI72
• Organism: Streptococcus gallolyticus strain NCTC13773
• Function: regulate competence (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1391351..1409779	1393039..1394811	within	0

Gene organization within MGE regions

Location: 1391351..1409779

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN21_RS07075 (NCTC13773_01436)	-	1391351..1391803 (-)	453	WP_009854390.1	MarR family winged helix-turn-helix transcriptional regulator	-
DQN21_RS07080 (NCTC13773_01437)	-	1391793..1392770 (-)	978	WP_009854391.1	zinc-binding dehydrogenase	-
DQN21_RS07085 (NCTC13773_01438)	rcrQ	1393039..1394811 (-)	1773	WP_009854392.1	ABC transporter ATP-binding protein	Regulator
DQN21_RS07090 (NCTC13773_01439)	rcrP	1394801..1396615 (-)	1815	WP_009854393.1	ABC transporter ATP-binding protein	Regulator
DQN21_RS07095 (NCTC13773_01440)	rcrR	1396619..1397059 (-)	441	WP_012962070.1	MarR family winged helix-turn-helix transcriptional regulator	Regulator
DQN21_RS07100 (NCTC13773_01441)	-	1397234..1397644 (-)	411	WP_009854395.1	peptide deformylase	-
DQN21_RS07105 (NCTC13773_01442)	-	1397641..1398150 (-)	510	WP_077496988.1	GNAT family N-acetyltransferase	-
DQN21_RS07110 (NCTC13773_01443)	gdhA	1398417..1399766 (-)	1350	WP_009854398.1	NADP-specific glutamate dehydrogenase	-
DQN21_RS07115 (NCTC13773_01444)	-	1400013..1400510 (+)	498	WP_009854399.1	DUF308 domain-containing protein	-
DQN21_RS12680 (NCTC13773_01445)	queF	1400567..1401058 (-)	492	WP_009854400.1	preQ(1) synthase	-
DQN21_RS12685 (NCTC13773_01446)	queE	1401071..1401784 (-)	714	WP_009854401.1	7-carboxy-7-deazaguanine synthase QueE	-
DQN21_RS07125 (NCTC13773_01447)	queD	1401777..1402223 (-)	447	WP_009854402.1	6-carboxytetrahydropterin synthase QueD	-
DQN21_RS07130 (NCTC13773_01448)	queC	1402229..1402876 (-)	648	WP_043878574.1	7-cyano-7-deazaguanine synthase QueC	-
DQN21_RS07135 (NCTC13773_01449)	-	1403117..1404886 (-)	1770	WP_009854404.1	ABC transporter ATP-binding protein	-
DQN21_RS07140 (NCTC13773_01450)	-	1404889..1406628 (-)	1740	WP_043878575.1	ABC transporter ATP-binding protein	-
DQN21_RS07145 (NCTC13773_01451)	-	1406706..1408577 (-)	1872	WP_009854406.1	ABC-F family ATP-binding cassette domain-containing protein	-
DQN21_RS07150 (NCTC13773_01452)	-	1408574..1409779 (-)	1206	WP_009854407.1	CCA tRNA nucleotidyltransferase	-

Sequence

Protein

• Length: 590 a.a.
• Molecular weight: 65251.34 Da
• Isoelectric Point: 5.1292

>NTDB_id=1140568 DQN21_RS07085 WP_009854392.1 1393039..1394811(-) (rcrQ) [Streptococcus gallolyticus strain NCTC13773]
MENKKKTSFYGRMKPYIKGFQLPFLLAVIGAIVSATVTVIGPDKLKEITNTITKGLTPTATGMIPGIDLDKVGEIALTLA
ILYVISAVVGYIQSFTVATIVQRFSQRLRKAIQTKIDKVPLNYFDSHSQGDTLSRVTNDVDLLGQSLNQSLGTLVTSTML
LIGSIFMMFHSNVSMALTAIGSVLIGFVLVMVIMGSSQPLFKRQQNNLAAINGYVEEIYSGHNVVTSYNAAGETSETFKK
LNTNLYKSMWQSQFLSGIMMPLMIFVGNFGYVMVCVVGAVKVINGDITMGDVVAFMTYVRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEDEMEDESDKERQLSDVNGEVAFDNVFFGYSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGRITIDGVDTRLMTREEVHDQFSMVLQDTWLFEGTIKENLIYNQENITDEQVIAAAKAVGVHHFIMTLPKGYDT
YLDDSVTLSIGQKQLLTIARALLKDSPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDDLMQQGGFYADLYNSQFEVA

Nucleotide

• Length: 1773 bp

>NTDB_id=1140568 DQN21_RS07085 WP_009854392.1 1393039..1394811(-) (rcrQ) [Streptococcus gallolyticus strain NCTC13773]
ATGGAAAATAAGAAAAAAACATCTTTCTATGGCAGAATGAAGCCCTACATTAAAGGTTTCCAGCTTCCATTTCTTCTTGC
AGTGATTGGAGCAATTGTTTCTGCGACGGTTACGGTTATTGGACCTGATAAATTAAAAGAAATCACCAATACAATCACCA
AAGGTTTGACACCAACGGCGACTGGTATGATTCCAGGAATCGACTTGGATAAAGTTGGTGAAATTGCATTAACTTTGGCA
ATTTTATACGTTATTTCAGCAGTAGTTGGTTATATTCAAAGCTTTACCGTAGCGACTATCGTTCAACGTTTTTCACAACG
TTTACGTAAAGCTATTCAGACCAAAATTGACAAGGTTCCATTGAATTACTTTGATAGTCATTCGCAAGGGGACACCCTTT
CTCGTGTGACAAATGACGTTGACTTGCTTGGTCAATCGCTTAACCAAAGTTTGGGAACTTTGGTGACATCAACCATGTTA
TTGATTGGTTCAATTTTCATGATGTTCCATTCAAATGTCAGCATGGCTTTAACAGCGATTGGGTCTGTTCTGATTGGTTT
TGTTTTGGTTATGGTTATCATGGGCTCATCACAACCATTGTTCAAACGCCAACAAAATAACTTGGCTGCGATTAACGGTT
ATGTTGAAGAAATTTACTCTGGTCATAATGTGGTAACAAGTTATAACGCTGCTGGTGAAACAAGCGAAACCTTTAAAAAA
TTAAACACCAATCTTTATAAATCAATGTGGCAATCACAGTTCTTGTCAGGTATTATGATGCCGCTTATGATTTTCGTTGG
GAACTTTGGGTATGTTATGGTCTGTGTGGTTGGTGCCGTTAAAGTTATCAATGGTGATATTACCATGGGTGACGTGGTTG
CCTTTATGACTTATGTTCGTATCTTCTCACAACCATTGTCACAAATTGCGCAAGCTTTCACACAAATGCAATCAGCAACA
GCTGCCATGAGTCGTGTCTTTGAATTCCTTGAAGAAGATGAAATGGAAGACGAGTCTGACAAGGAACGTCAACTTAGTGA
TGTTAATGGTGAAGTTGCCTTTGATAATGTTTTCTTTGGTTATTCTAAGGATAAAACAATTATCCATGATTTCTCAGCTG
TGGCGAAACCTGGTCAGAAAGTTGCCATTGTTGGACCAACAGGTGCTGGTAAAACAACCATTGTTAACCTGCTCATGAAA
TTCTATGAAATCGATAAAGGTCGAATCACTATTGATGGTGTGGATACACGTTTGATGACACGTGAAGAAGTGCATGACCA
ATTCTCAATGGTGCTTCAAGATACGTGGTTGTTTGAAGGAACAATCAAAGAAAACTTGATTTACAATCAAGAAAATATTA
CAGATGAACAAGTTATTGCAGCGGCTAAGGCTGTTGGTGTTCATCACTTTATCATGACACTTCCAAAAGGTTATGACACT
TATCTTGATGATTCTGTAACGCTTTCAATTGGTCAAAAACAACTCTTGACGATTGCGCGTGCTCTTCTGAAAGATTCACC
GCTCCTTATTTTGGACGAAGCAACGTCATCAGTTGATACACGTACTGAAGAATTGATTCAAAAAGCCATGGATAAATTGA
TGGAAGGTCGTACATCATTTGTTATCGCTCACCGTTTGTCAACGATTAGAAACGCTGACCTTATCCTTGTGATGAAAGAT
GGTAACATCATCGAACAAGGCAATCACGATGATTTGATGCAACAAGGCGGCTTCTATGCTGACCTCTACAATTCACAATT
TGAAGTAGCTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (370-516)

• ABC transporter transmembrane region (ABC_membrane) (25-306)

3D structure

• AlphaFold DB: A0A060RI72

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rcrQ	Streptococcus mutans UA159	73.649	100	0.739