Detailed information NTG1140562

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: DQN21_RS04660
• Genome accession: NZ_LS483409
• Coordinates: 881106..881972 (+)
• Length: 288 a.a.
• NCBI ID: WP_009853913.1
• Uniprot ID: -
• Organism: Streptococcus gallolyticus strain NCTC13773
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 876106..886972

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN21_RS04630 (NCTC13773_00934)	-	876382..877260 (+)	879	WP_003064089.1	F0F1 ATP synthase subunit gamma	-
DQN21_RS04635 (NCTC13773_00935)	atpD	877327..878733 (+)	1407	WP_077496601.1	F0F1 ATP synthase subunit beta	-
DQN21_RS04640 (NCTC13773_00936)	-	878746..879162 (+)	417	WP_077496603.1	F0F1 ATP synthase subunit epsilon	-
DQN21_RS04645 (NCTC13773_00937)	-	879227..879463 (+)	237	WP_012961763.1	DUF1146 family protein	-
DQN21_RS04650 (NCTC13773_00938)	murA	879526..880800 (+)	1275	WP_061458497.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
DQN21_RS04655 (NCTC13773_00939)	-	880803..880991 (+)	189	WP_009853912.1	DNA-directed RNA polymerase subunit beta	-
DQN21_RS04660 (NCTC13773_00940)	endA	881106..881972 (+)	867	WP_009853913.1	DNA/RNA non-specific endonuclease	Machinery gene
DQN21_RS04665 (NCTC13773_00941)	-	882108..883130 (+)	1023	WP_077496605.1	NAD-dependent epimerase/dehydratase family protein	-
DQN21_RS04670 (NCTC13773_00942)	-	883203..883952 (+)	750	WP_077496607.1	SDR family oxidoreductase	-
DQN21_RS04675 (NCTC13773_00944)	-	884162..884572 (+)	411	WP_074656786.1	MerR family transcriptional regulator	-
DQN21_RS04680 (NCTC13773_00945)	pheS	884908..885951 (+)	1044	WP_013642932.1	phenylalanine--tRNA ligase subunit alpha	-
DQN21_RS04685 (NCTC13773_00946)	-	885987..886511 (+)	525	WP_077496609.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 288 a.a.
• Molecular weight: 30797.82 Da
• Isoelectric Point: 5.6772

>NTDB_id=1140562 DQN21_RS04660 WP_009853913.1 881106..881972(+) (endA) [Streptococcus gallolyticus strain NCTC13773]
MAKKSKLSKQTKSLLSLVILLVGIGTGWVTISDSNDPLNQVVSLITGDSSSEITSNQSSSDSATPTQALAETVLTDSVKE
QLGANIEWNGAGAYIINDNQTSLNAKVSSQPYANNKTKTVQGQTVPTVANALLSKSTRQYKSREETGNGSTSWTPAGWHQ
VQDLSGTYSHAVDRGHLLGYALVGGLKGFDASTSNPDNVATQTAWANEANSESSTGQNYYESLVRKALDQNKRVRYRVTL
IYDGDNLLASGTHLEAKSSDGSLEFNVFVPNVQSGLTFDYYSGQVSVN

Nucleotide

• Length: 867 bp

>NTDB_id=1140562 DQN21_RS04660 WP_009853913.1 881106..881972(+) (endA) [Streptococcus gallolyticus strain NCTC13773]
ATGGCAAAGAAATCAAAATTGTCTAAACAGACAAAATCCCTGCTGTCTTTGGTGATTTTGTTAGTTGGTATTGGTACTGG
TTGGGTGACGATATCAGATTCGAACGATCCGCTCAATCAAGTCGTTTCGTTAATTACTGGTGACTCCTCTTCTGAAATAA
CGTCAAATCAATCGAGTTCTGATTCAGCAACGCCAACACAAGCTTTAGCAGAGACGGTATTAACAGATAGTGTCAAAGAG
CAGTTGGGAGCAAATATAGAATGGAATGGTGCGGGAGCCTATATTATCAATGATAATCAAACATCCCTAAATGCAAAAGT
TTCAAGTCAACCTTACGCCAACAACAAAACGAAAACGGTGCAAGGTCAGACTGTTCCAACGGTTGCTAATGCTTTGCTAA
GTAAGTCAACTCGTCAATACAAAAGTCGTGAGGAGACTGGAAATGGCTCAACGTCTTGGACGCCAGCTGGTTGGCATCAA
GTTCAAGACCTTTCAGGGACTTATAGCCATGCGGTAGATCGTGGTCATTTGCTTGGTTATGCTTTGGTCGGTGGTCTGAA
AGGCTTTGATGCGTCAACGAGCAACCCTGACAATGTGGCAACACAGACTGCCTGGGCAAACGAGGCAAATTCGGAAAGTT
CAACTGGTCAAAATTACTATGAATCCCTTGTCCGCAAAGCTCTTGACCAGAATAAACGAGTTCGTTACCGTGTTACCTTG
ATTTACGACGGTGATAATCTCTTAGCAAGCGGAACGCATTTGGAAGCCAAATCATCTGACGGTAGTTTAGAATTTAACGT
CTTTGTTCCAAATGTGCAAAGCGGACTGACATTTGATTATTATTCAGGTCAAGTTAGTGTGAATTGA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (95-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	66.935	86.111	0.576
endA	Streptococcus pneumoniae D39	66.935	86.111	0.576
endA	Streptococcus pneumoniae R6	66.935	86.111	0.576
endA	Streptococcus pneumoniae TIGR4	66.935	86.111	0.576