Detailed information NTG1140278

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DQM79_RS01470
• Genome accession: NZ_LS483401
• Coordinates: 269451..270374 (+)
• Length: 307 a.a.
• NCBI ID: WP_002986000.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC10085
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 264451..275374

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM79_RS01455 (NCTC10085_00289)	amiC	265951..267453 (+)	1503	WP_002991105.1	ABC transporter permease	Regulator
DQM79_RS01460 (NCTC10085_00290)	amiD	267453..268379 (+)	927	WP_002986004.1	oligopeptide ABC transporter permease OppC	Regulator
DQM79_RS01465 (NCTC10085_00291)	amiE	268388..269458 (+)	1071	WP_002986002.1	ABC transporter ATP-binding protein	Regulator
DQM79_RS01470 (NCTC10085_00292)	amiF	269451..270374 (+)	924	WP_002986000.1	ABC transporter ATP-binding protein	Regulator
DQM79_RS09435	-	270359..270496 (-)	138	Protein_237	IS3 family transposase	-
DQM79_RS09195	-	270523..270702 (-)	180	WP_100215900.1	transposase	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34715.90 Da
• Isoelectric Point: 6.5113

>NTDB_id=1140278 DQM79_RS01470 WP_002986000.1 269451..270374(+) (amiF) [Streptococcus pyogenes strain NCTC10085]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERQKELVVYHPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=1140278 DQM79_RS01470 WP_002986000.1 269451..270374(+) (amiF) [Streptococcus pyogenes strain NCTC10085]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAGTCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGTTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAATCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGGGCAACCGTTGA
CTACATCATTTCAGAAGGCCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCTCATGAATTTTCAGGAGGTCAACGTCAGCGAATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAACCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTCTTGAATCTTCTTAAAAGAATGCAAGCCGAAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TGTTGTCTATCATCCAGACCAGCATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.353	99.674	0.821
amiF	Streptococcus thermophilus LMD-9	82.026	99.674	0.818
amiF	Streptococcus salivarius strain HSISS4	82.026	99.674	0.818