Detailed information NTG1140165

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: DQM95_RS03880
• Genome accession: NZ_LS483397
• Coordinates: 697824..698702 (+)
• Length: 292 a.a.
• NCBI ID: WP_037592307.1
• Uniprot ID: -
• Organism: Streptococcus uberis strain NCTC3858
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 692824..703702

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM95_RS03850 (NCTC3858_00788)	-	693114..693989 (+)	876	WP_012658189.1	F0F1 ATP synthase subunit gamma	-
DQM95_RS03855 (NCTC3858_00789)	atpD	694112..695518 (+)	1407	WP_111685944.1	F0F1 ATP synthase subunit beta	-
DQM95_RS03860 (NCTC3858_00790)	-	695532..695948 (+)	417	WP_037592309.1	F0F1 ATP synthase subunit epsilon	-
DQM95_RS03865 (NCTC3858_00791)	-	696030..696254 (+)	225	WP_012658192.1	DUF1146 family protein	-
DQM95_RS03870 (NCTC3858_00792)	murA	696329..697600 (+)	1272	WP_111685945.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
DQM95_RS03875 (NCTC3858_00793)	-	697604..697792 (+)	189	WP_037592308.1	DNA-directed RNA polymerase subunit beta	-
DQM95_RS03880 (NCTC3858_00794)	endA	697824..698702 (+)	879	WP_037592307.1	DNA/RNA non-specific endonuclease	Machinery gene
DQM95_RS03885 (NCTC3858_00795)	pheS	699005..700048 (+)	1044	WP_037592306.1	phenylalanine--tRNA ligase subunit alpha	-
DQM95_RS03890 (NCTC3858_00796)	-	700095..700619 (+)	525	WP_037592305.1	N-acetyltransferase	-
DQM95_RS03895 (NCTC3858_00797)	pheT	700634..703039 (+)	2406	WP_037592304.1	phenylalanine--tRNA ligase subunit beta	-
DQM95_RS03900 (NCTC3858_00798)	-	703141..703515 (+)	375	WP_037592303.1	OsmC family protein	-

Sequence

Protein

• Length: 292 a.a.
• Molecular weight: 32171.84 Da
• Isoelectric Point: 9.8437

>NTDB_id=1140165 DQM95_RS03880 WP_037592307.1 697824..698702(+) (endA) [Streptococcus uberis strain NCTC3858]
MSNKHPSGKKISAILIALLITGLTALSQGNQSANNPIAHVLQSISGQGNRQSNQKDSQNPDTPSYQLASSVLTNQVKQQL
GNQIEWNGAGAFIINHNKTDLKAKVSSLPYAHNETKMVQGQKVPSRANALLARSTRQYRDRNETGNGYTFWKPVGWHQIH
GLSGEYDHAVDRGHLLGYALVGGLKGFDASTSNPENIAVQMSWANQAYLSDSTGQNYYETLIRKSLDKNKRVRYRVTLIY
EGDNLISSGSHLEAKSDDGSLEFNVFVPNVQKGLKMNYYNGSVEKDAYQKAS

Nucleotide

• Length: 879 bp

>NTDB_id=1140165 DQM95_RS03880 WP_037592307.1 697824..698702(+) (endA) [Streptococcus uberis strain NCTC3858]
ATGTCAAATAAACACCCAAGTGGCAAAAAAATAAGTGCCATTCTAATAGCTCTGCTCATTACAGGATTAACAGCTCTTTC
TCAGGGCAATCAATCTGCCAATAATCCAATTGCTCATGTTTTGCAGAGCATTTCCGGGCAGGGAAATAGGCAGAGCAATC
AAAAAGATTCTCAAAATCCGGATACTCCCAGTTATCAATTAGCAAGTTCTGTGCTTACAAATCAAGTCAAGCAACAATTA
GGTAATCAGATTGAATGGAATGGCGCCGGAGCTTTTATTATTAATCACAATAAGACAGATTTAAAGGCAAAAGTTTCAAG
TTTACCTTACGCACATAATGAAACGAAAATGGTACAAGGTCAAAAGGTACCAAGTCGAGCTAATGCCTTACTTGCTCGCT
CAACGAGACAATATAGAGATCGAAACGAAACTGGAAATGGTTATACTTTTTGGAAACCAGTTGGATGGCATCAAATACAT
GGTCTATCAGGGGAATATGACCATGCCGTTGATCGCGGGCATTTATTAGGCTATGCCTTAGTCGGAGGATTAAAAGGTTT
TGATGCTTCAACAAGTAATCCAGAGAACATTGCTGTTCAAATGTCATGGGCTAACCAAGCATATCTGTCCGATTCTACTG
GACAAAATTACTATGAAACCTTAATTCGAAAAAGTTTAGATAAGAATAAGCGGGTTCGCTATCGAGTGACCTTAATTTAT
GAAGGTGACAATCTGATTTCGAGTGGTAGTCATTTGGAAGCAAAGTCGGATGATGGCAGCTTAGAATTCAATGTTTTTGT
ACCAAATGTTCAAAAAGGGTTAAAAATGAATTACTATAATGGTAGCGTTGAAAAAGATGCTTACCAGAAAGCAAGTTAA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (91-245)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	64.758	77.74	0.503
endA	Streptococcus pneumoniae D39	64.758	77.74	0.503
endA	Streptococcus pneumoniae R6	64.758	77.74	0.503
endA	Streptococcus pneumoniae TIGR4	64.758	77.74	0.503