Detailed information NTG1140084

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DQM37_RS01455
• Genome accession: NZ_LS483394
• Coordinates: 267231..268154 (+)
• Length: 307 a.a.
• NCBI ID: WP_109828499.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC10880
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 262231..273154

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM37_RS01440 (NCTC10880_00285)	amiC	263731..265233 (+)	1503	WP_111694672.1	ABC transporter permease	Regulator
DQM37_RS01445 (NCTC10880_00286)	amiD	265233..266159 (+)	927	WP_002986004.1	oligopeptide ABC transporter permease OppC	Regulator
DQM37_RS01450 (NCTC10880_00287)	amiE	266168..267238 (+)	1071	WP_010921893.1	ABC transporter ATP-binding protein	Regulator
DQM37_RS01455 (NCTC10880_00288)	amiF	267231..268154 (+)	924	WP_109828499.1	ABC transporter ATP-binding protein	Regulator
DQM37_RS09325	-	268192..268275 (-)	84	Protein_234	IS3 family transposase	-
DQM37_RS01465	-	268324..268548 (-)	225	WP_227876888.1	transposase	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34729.93 Da
• Isoelectric Point: 6.5113

>NTDB_id=1140084 DQM37_RS01455 WP_109828499.1 267231..268154(+) (amiF) [Streptococcus pyogenes strain NCTC10880]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERQKELIVYHPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=1140084 DQM37_RS01455 WP_109828499.1 267231..268154(+) (amiF) [Streptococcus pyogenes strain NCTC10880]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAGTCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGTTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAATCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGGGCAACCGTTGA
CTACATCATTTCAGAAGGTCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCTCATGAATTTTCAGGAGGTCAACGTCAGCGGATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAACCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTCTTGAATCTTCTTAAAAGAATGCAAGCCGAAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TATTGTCTATCATCCAGACCAGCATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.353	99.674	0.821
amiF	Streptococcus thermophilus LMD-9	82.026	99.674	0.818
amiF	Streptococcus salivarius strain HSISS4	82.026	99.674	0.818