Detailed information NTG1139972

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DQN61_RS01405
• Genome accession: NZ_LS483391
• Coordinates: 255884..256807 (+)
• Length: 307 a.a.
• NCBI ID: WP_011017336.1
• Uniprot ID: Q8P2L5
• Organism: Streptococcus pyogenes strain NCTC8320
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 250884..261807

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN61_RS01390 (NCTC8320_00281)	amiC	252384..253886 (+)	1503	WP_011017334.1	ABC transporter permease	Regulator
DQN61_RS01395 (NCTC8320_00282)	amiD	253886..254812 (+)	927	WP_002986004.1	oligopeptide ABC transporter permease OppC	Regulator
DQN61_RS01400 (NCTC8320_00283)	amiE	254821..255891 (+)	1071	WP_011017335.1	ABC transporter ATP-binding protein	Regulator
DQN61_RS01405 (NCTC8320_00284)	amiF	255884..256807 (+)	924	WP_011017336.1	ABC transporter ATP-binding protein	Regulator
DQN61_RS10140	-	256845..256928 (-)	84	Protein_227	IS3 family transposase	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34773.94 Da
• Isoelectric Point: 6.3176

>NTDB_id=1139972 DQN61_RS01405 WP_011017336.1 255884..256807(+) (amiF) [Streptococcus pyogenes strain NCTC8320]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKDLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERQKELVVYHPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=1139972 DQN61_RS01405 WP_011017336.1 255884..256807(+) (amiF) [Streptococcus pyogenes strain NCTC8320]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAATCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGTTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAATCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGAGCAACCGTTGA
CTACATCATTTCAGAAGGTCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCACATGAATTTTCAGGAGGTCAACGTCAGCGGATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAACCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTTTTAAACCTTCTCAAACGGATGCAAGCCGAAAAAGATTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TGTTGTCTATCATCCAGACCAGCATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

3D structure

• AlphaFold DB: Q8P2L5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.026	99.674	0.818
amiF	Streptococcus thermophilus LMD-9	81.699	99.674	0.814
amiF	Streptococcus salivarius strain HSISS4	81.699	99.674	0.814