Detailed information NTG0113873

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SFR_RS27935
• Genome accession: NZ_CP009802
• Coordinates: 6285173..6286537 (+)
• Length: 454 a.a.
• NCBI ID: WP_003947047.1
• Uniprot ID: A0ABR4S6Y1
• Organism: Streptomyces sp. FR-008
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6280173..6291537

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SFR_RS27915 (SFR_6215)	-	6281188..6282018 (-)	831	WP_003947051.1	peptidylprolyl isomerase	-
SFR_RS27920 (SFR_6216)	-	6282182..6282901 (+)	720	WP_067410783.1	MBL fold metallo-hydrolase	-
SFR_RS27925 (SFR_6217)	hisS	6282916..6284178 (+)	1263	WP_075987587.1	histidine--tRNA ligase	-
SFR_RS27930 (SFR_6219)	-	6284461..6285105 (+)	645	WP_010636559.1	vitamin K epoxide reductase family protein	-
SFR_RS27935 (SFR_6220)	rarA	6285173..6286537 (+)	1365	WP_003947047.1	replication-associated recombination protein A	Machinery gene
SFR_RS27940 (SFR_6221)	rpsD	6286906..6287520 (+)	615	WP_003947046.1	30S ribosomal protein S4	-
SFR_RS27945 (SFR_6222)	-	6287768..6288220 (+)	453	WP_026047935.1	DUF948 domain-containing protein	-
SFR_RS27950 (SFR_6223)	-	6288227..6288589 (+)	363	WP_067410773.1	hypothetical protein	-
SFR_RS27955 (SFR_6224)	alaS	6288589..6291261 (+)	2673	WP_003947043.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 47947.26 Da
• Isoelectric Point: 6.2449

>NTDB_id=113873 SFR_RS27935 WP_003947047.1 6285173..6286537(+) (rarA) [Streptomyces sp. FR-008]
MEPDLFTAAAEDRQEKDPSSSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGGGGPAGPSSVFLWGPPGIGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRASGGFGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDEDLRGLVHRALTDERGLAGSVTLAEDAEAHLLRVAGGDARRALTALEAGAGAALDKGEAE
ITLTTLEESVDRAAVAYDRAGDQHYDVASALIKSIRGSDVDAALHYLARMIDAGEDPRFIARRLMISASEDIGLADPTAL
PTAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAALEDVRKGHAGPVPTHLRDGHYKGAAKLGHAQGYIY
PHDVPGAIAAQQYAPDALAGKRYYQPTRYGAEARYADVVEKVRERLAEGGRGEG

Nucleotide

• Length: 1365 bp

>NTDB_id=113873 SFR_RS27935 WP_003947047.1 6285173..6286537(+) (rarA) [Streptomyces sp. FR-008]
GTGGAACCCGACCTCTTCACCGCAGCAGCCGAGGACCGCCAGGAGAAGGACCCGTCCAGCAGCCCCCTGGCCGTCCGGAT
GCGCCCCCGCACCCTGGACGAGGTGGTCGGCCAGCAGCACCTGCTCAAGCCCGGATCGCCGCTGCGCCGCCTCGTCGGCG
AGGGCGGCGGCGGCCCGGCCGGCCCCTCCTCCGTCTTCCTCTGGGGCCCGCCCGGCATCGGCAAGACGACCCTCGCGTAC
GTGGTCAGCAAGGCGACCAACAAGCGGTTCGTGGAGCTGTCCGCGATCACCGCCGGGGTCAAGGAGGTGCGCGCCGTCAT
CGACGGCGCCCGCCGCGCCTCCGGCGGCTTCGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCTCCAAGG
CCCAGCAGGACTCCCTGCTGCCCGCCGTGGAGAACCGCTGGGTCACCCTCATCGCCGCCACCACCGAGAATCCGTACTTC
TCGGTGATCTCCCCGCTGCTCTCCCGCTCCCTGCTGCTCACCCTGGAGCCGCTGACCGACGAGGACCTGCGCGGCCTCGT
CCACCGCGCCCTCACCGACGAGCGGGGCCTGGCCGGCTCCGTCACCCTCGCCGAGGACGCCGAGGCCCACCTGCTGCGGG
TCGCCGGAGGCGACGCCCGCCGGGCCCTGACCGCCCTGGAGGCGGGCGCCGGGGCCGCGCTCGACAAGGGCGAGGCGGAG
ATCACCCTCACCACCCTCGAGGAGTCGGTGGACCGGGCCGCCGTCGCCTACGACCGCGCCGGCGACCAGCACTACGACGT
GGCGAGCGCCCTCATCAAGTCCATCCGCGGCTCGGACGTGGACGCCGCCCTGCACTATCTGGCCCGGATGATCGACGCGG
GGGAGGACCCCCGCTTCATCGCCCGCCGCCTGATGATCTCGGCCAGCGAGGACATCGGCCTCGCCGACCCCACCGCCCTG
CCCACCGCGGTCGCCGCCGCCCAGGCCGTGGCCATGATCGGCTTCCCCGAGGCCGCGCTGACCCTCAGCCACGCCACCAT
CGCCCTCGCCCTGGCCCCCAAGTCCAACGCCGCCACCACCGCCATCGGCGCCGCCCTGGAGGACGTCCGCAAGGGCCACG
CCGGACCGGTCCCCACCCACCTGCGGGACGGCCACTACAAGGGCGCGGCCAAGCTCGGCCACGCCCAGGGGTACATCTAC
CCGCACGACGTCCCCGGCGCCATCGCCGCCCAGCAGTACGCTCCGGACGCCCTCGCCGGGAAGCGCTACTACCAGCCCAC
CCGGTACGGCGCGGAGGCCCGCTACGCCGACGTGGTCGAGAAGGTCCGCGAGCGCCTCGCCGAGGGCGGCCGCGGCGAGG
GCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (199-276)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-442)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.419	94.714	0.421