Detailed information NTG1138632

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DQM58_RS09715
• Genome accession: NZ_LS483363
• Coordinates: 1914435..1915367 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1909435..1920367

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM58_RS09690 (NCTC9414_01982)	tsaD	1909925..1910941 (-)	1017	WP_003056674.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
DQM58_RS09695 (NCTC9414_01983)	rimI	1910931..1911356 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
DQM58_RS09700 (NCTC9414_01984)	tsaB	1911358..1912056 (-)	699	WP_003062223.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
DQM58_RS09705 (NCTC9414_01985)	-	1912342..1912572 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
DQM58_RS09710 (NCTC9414_01986)	rnjA	1912574..1914256 (+)	1683	WP_003056700.1	ribonuclease J1	-
DQM58_RS09715 (NCTC9414_01987)	amiF	1914435..1915367 (-)	933	WP_003060110.1	ATP-binding cassette domain-containing protein	Regulator
DQM58_RS09720 (NCTC9414_01988)	oppD	1915360..1916412 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
DQM58_RS09725 (NCTC9414_01989)	-	1916424..1917455 (-)	1032	WP_003058013.1	ABC transporter permease	-
DQM58_RS09730 (NCTC9414_01990)	-	1917465..1918379 (-)	915	WP_003052794.1	ABC transporter permease	-
DQM58_RS09735 (NCTC9414_01991)	-	1918647..1920302 (-)	1656	WP_111681896.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=1138632 DQM58_RS09715 WP_003060110.1 1914435..1915367(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=1138632 DQM58_RS09715 WP_003060110.1 1914435..1915367(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526