Detailed information NTG1138618

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: DQM58_RS07575
• Genome accession: NZ_LS483363
• Coordinates: 1478206..1479072 (-)
• Length: 288 a.a.
• NCBI ID: WP_042357882.1
• Uniprot ID: A0AB38Y3D2
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1473206..1484072

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM58_RS07555 (NCTC9414_01541)	-	1473399..1473785 (-)	387	WP_046177172.1	DUF1722 domain-containing protein	-
DQM58_RS07560 (NCTC9414_01542)	-	1473778..1474155 (-)	378	WP_002993028.1	OsmC family protein	-
DQM58_RS07565 (NCTC9414_01543)	pheT	1474265..1476670 (-)	2406	WP_111706133.1	phenylalanine--tRNA ligase subunit beta	-
DQM58_RS07570 (NCTC9414_01544)	pheS	1476880..1477923 (-)	1044	WP_003057440.1	phenylalanine--tRNA ligase subunit alpha	-
DQM58_RS07575 (NCTC9414_01545)	endA	1478206..1479072 (-)	867	WP_042357882.1	DNA/RNA non-specific endonuclease	Machinery gene
DQM58_RS07580 (NCTC9414_01546)	-	1479108..1479296 (-)	189	WP_003057490.1	DNA-directed RNA polymerase subunit beta	-
DQM58_RS07585 (NCTC9414_01547)	murA	1479300..1480571 (-)	1272	WP_015016870.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
DQM58_RS07590 (NCTC9414_01548)	-	1480636..1480872 (-)	237	WP_274047614.1	DUF1146 family protein	-
DQM58_RS07595 (NCTC9414_01549)	-	1481201..1481617 (-)	417	WP_002985233.1	F0F1 ATP synthase subunit epsilon	-
DQM58_RS07600 (NCTC9414_01550)	atpD	1481630..1483036 (-)	1407	WP_111681637.1	F0F1 ATP synthase subunit beta	-

Sequence

Protein

• Length: 288 a.a.
• Molecular weight: 31888.90 Da
• Isoelectric Point: 10.1381

>NTDB_id=1138618 DQM58_RS07575 WP_042357882.1 1478206..1479072(-) (endA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414]
MLTRKKRKRVLNSFLLILLVLGSSYLAKSDFIASNHPIKQIYRTVLGDKGESSSESKEAYSEVPTEALSASVLTKSIKEQ
LGSNIEWNGAGAYIINRNKTDLNASVASLPYANNETKWVQGQKVPTRANALLTKSTRQYRNRYQTDNAYRTFKPAGWHQL
HHLKGNYDHAVDRGHLLGYALVGGLKGFDASTSNPDNIATQLSWANQADKPYSTGQNYYEGLVRRALDKGKRVRYRVTLL
YDGDNLLASGSQLEAKSADGSLAFNVFVPNVQAGLTVDYRTGQIAINP

Nucleotide

• Length: 867 bp

>NTDB_id=1138618 DQM58_RS07575 WP_042357882.1 1478206..1479072(-) (endA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414]
ATGTTAACAAGGAAAAAACGAAAAAGGGTGCTTAATTCCTTCTTATTGATTTTGTTAGTGTTGGGGTCTAGTTACCTTGC
TAAGAGTGATTTCATAGCTAGCAATCACCCTATTAAGCAAATTTATCGTACCGTTTTGGGAGATAAGGGTGAATCATCAT
CAGAATCAAAAGAAGCCTATAGTGAGGTTCCCACAGAAGCCCTATCCGCTTCTGTCTTGACCAAATCCATTAAGGAACAA
TTAGGTTCCAATATTGAATGGAATGGAGCAGGCGCCTATATTATCAACAGGAACAAAACAGATTTAAACGCAAGTGTAGC
CAGTCTGCCCTATGCCAATAATGAAACCAAATGGGTCCAAGGACAAAAGGTTCCTACTAGAGCTAATGCCTTACTTACTA
AGTCGACACGACAGTATCGAAATCGCTATCAAACGGACAATGCTTATCGTACCTTCAAGCCTGCTGGTTGGCACCAATTA
CATCACTTAAAAGGAAATTATGACCACGCAGTTGATAGAGGACATTTGCTAGGTTATGCTTTAGTCGGTGGACTGAAAGG
TTTTGATGCATCTACCAGTAATCCTGATAACATTGCTACTCAACTAAGTTGGGCCAATCAAGCAGATAAACCCTATTCGA
CAGGTCAAAATTACTATGAAGGATTAGTACGTCGTGCATTGGATAAGGGCAAAAGGGTCCGTTATCGTGTTACCTTGCTT
TATGATGGTGATAATCTGTTAGCCAGTGGCAGCCAGTTAGAGGCCAAATCTGCCGATGGGAGTTTAGCATTTAACGTGTT
TGTTCCAAATGTTCAAGCAGGGTTGACGGTTGATTATCGAACAGGACAGATTGCCATCAATCCCTAG

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (121-246)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	62.393	81.25	0.507
endA	Streptococcus pneumoniae D39	62.393	81.25	0.507
endA	Streptococcus pneumoniae R6	62.393	81.25	0.507
endA	Streptococcus pneumoniae TIGR4	62.393	81.25	0.507