Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DQM58_RS00815 | Genome accession | NZ_LS483363 |
| Coordinates | 132038..132991 (+) | Length | 317 a.a. |
| NCBI ID | WP_003060701.1 | Uniprot ID | A0A9X8T146 |
| Organism | Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 127038..137991
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM58_RS00775 (NCTC9414_00161) | - | 127864..128229 (+) | 366 | WP_003055257.1 | DUF1033 family protein | - |
| DQM58_RS00780 (NCTC9414_00162) | comGA/cglA | 128310..129251 (+) | 942 | WP_003062163.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQM58_RS00785 (NCTC9414_00163) | comGB | 129187..130218 (+) | 1032 | Protein_109 | competence type IV pilus assembly protein ComGB | - |
| DQM58_RS00790 (NCTC9414_00164) | comYC | 130220..130546 (+) | 327 | WP_003055259.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQM58_RS00795 (NCTC9414_00165) | comGD | 130521..130949 (+) | 429 | WP_014611932.1 | competence type IV pilus minor pilin ComGD | - |
| DQM58_RS00800 (NCTC9414_00166) | comGE | 130957..131202 (+) | 246 | WP_003058569.1 | competence type IV pilus minor pilin ComGE | - |
| DQM58_RS00805 (NCTC9414_00167) | comGF | 131183..131623 (+) | 441 | WP_003061780.1 | competence type IV pilus minor pilin ComGF | - |
| DQM58_RS00810 (NCTC9414_00168) | comGG | 131652..131975 (+) | 324 | WP_227985720.1 | competence type IV pilus minor pilin ComGG | - |
| DQM58_RS00815 (NCTC9414_00169) | comYH | 132038..132991 (+) | 954 | WP_003060701.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQM58_RS00820 (NCTC9414_00170) | - | 133050..134246 (+) | 1197 | WP_110407814.1 | acetate kinase | - |
| DQM58_RS00825 (NCTC9414_00171) | - | 134552..134758 (+) | 207 | WP_003058508.1 | helix-turn-helix transcriptional regulator | - |
| DQM58_RS00830 (NCTC9414_00172) | - | 134861..135541 (+) | 681 | WP_003060329.1 | type II CAAX endopeptidase family protein | - |
| DQM58_RS00835 (NCTC9414_00173) | - | 135559..135996 (+) | 438 | WP_012766452.1 | hypothetical protein | - |
| DQM58_RS00840 (NCTC9414_00174) | proC | 136136..136912 (-) | 777 | WP_003058540.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36049.01 Da Isoelectric Point: 4.7910
>NTDB_id=1138587 DQM58_RS00815 WP_003060701.1 132038..132991(+) (comYH) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=1138587 DQM58_RS00815 WP_003060701.1 132038..132991(+) (comYH) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414]
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGGAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
CAAAGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGAATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTCA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGCTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGATGGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGGAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
CAAAGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGAATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTCA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGCTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGATGGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.456 |
99.685 |
0.662 |
| comYH | Streptococcus mutans UA159 |
66.139 |
99.685 |
0.659 |