Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DQM46_RS00720 | Genome accession | NZ_LS483357 |
| Coordinates | 109195..110148 (+) | Length | 317 a.a. |
| NCBI ID | WP_021299429.1 | Uniprot ID | A0A660A6K5 |
| Organism | Streptococcus pyogenes strain NCTC8326 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 104195..115148
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM46_RS00680 (NCTC8326_00139) | - | 105022..105387 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| DQM46_RS00685 (NCTC8326_00140) | comYA | 105480..106418 (+) | 939 | WP_002987773.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQM46_RS00690 (NCTC8326_00141) | comYB | 106354..107388 (+) | 1035 | WP_011054115.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQM46_RS00695 (NCTC8326_00142) | comYC | 107390..107716 (+) | 327 | WP_011528161.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQM46_RS00700 (NCTC8326_00143) | comGD | 107691..108119 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | - |
| DQM46_RS00705 (NCTC8326_00144) | comGE | 108076..108360 (+) | 285 | WP_011528162.1 | competence type IV pilus minor pilin ComGE | - |
| DQM46_RS00710 (NCTC8326_00145) | comYF | 108353..108787 (+) | 435 | WP_002992738.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQM46_RS00715 (NCTC8326_00146) | comGG | 108771..109097 (+) | 327 | WP_010921801.1 | competence type IV pilus minor pilin ComGG | - |
| DQM46_RS00720 (NCTC8326_00147) | comYH | 109195..110148 (+) | 954 | WP_021299429.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQM46_RS00725 (NCTC8326_00148) | - | 110207..111403 (+) | 1197 | WP_011528164.1 | acetate kinase | - |
| DQM46_RS00730 | - | 111590..111898 (+) | 309 | WP_011528165.1 | hypothetical protein | - |
| DQM46_RS00735 (NCTC8326_00149) | proC | 111981..112751 (-) | 771 | WP_002986527.1 | pyrroline-5-carboxylate reductase | - |
| DQM46_RS00740 (NCTC8326_00150) | pepA | 112799..113866 (-) | 1068 | WP_011528166.1 | glutamyl aminopeptidase | - |
| DQM46_RS00750 (NCTC8326_00151) | - | 114331..114615 (+) | 285 | WP_002992749.1 | DUF4651 domain-containing protein | - |
| DQM46_RS00755 (NCTC8326_00152) | - | 114612..114929 (+) | 318 | WP_011528167.1 | thioredoxin family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36043.16 Da Isoelectric Point: 4.7205
>NTDB_id=1138309 DQM46_RS00720 WP_021299429.1 109195..110148(+) (comYH) [Streptococcus pyogenes strain NCTC8326]
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLVPVNLLTSPQ
SQLLKQWLKDYAQVVTLITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLVPVNLLTSPQ
SQLLKQWLKDYAQVVTLITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=1138309 DQM46_RS00720 WP_021299429.1 109195..110148(+) (comYH) [Streptococcus pyogenes strain NCTC8326]
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACG
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCTAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACCTGAAAAAAGACGGTTTTGCGATTTTTCTGGTACCAGTCAATTTATTGACAAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGACCTTGATTACGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACG
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCTAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACCTGAAAAAAGACGGTTTTGCGATTTTTCTGGTACCAGTCAATTTATTGACAAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGACCTTGATTACGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
65.506 |
99.685 |
0.653 |
| comYH | Streptococcus mutans UA140 |
65.19 |
99.685 |
0.65 |