Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsM   Type   Regulator
Locus tag   DQM59_RS09935 Genome accession   NZ_LS483349
Coordinates   1940772..1941218 (+) Length   148 a.a.
NCBI ID   WP_002262388.1    Uniprot ID   -
Organism   Streptococcus mutans strain NCTC10449     
Function   repress competence development; negative regulate BrsR activity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1935772..1946218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM59_RS09905 (NCTC10449_01922) - 1937287..1938858 (-) 1572 WP_002280018.1 hypothetical protein -
  DQM59_RS09915 (NCTC10449_01923) - 1939092..1939391 (-) 300 WP_002262384.1 DUF1292 domain-containing protein -
  DQM59_RS09920 (NCTC10449_01924) ruvX 1939472..1939891 (-) 420 WP_002262385.1 Holliday junction resolvase RuvX -
  DQM59_RS09925 (NCTC10449_01925) - 1939888..1940157 (-) 270 WP_002262386.1 IreB family regulatory phosphoprotein -
  DQM59_RS09930 (NCTC10449_01926) brsR 1940325..1940759 (+) 435 WP_002280017.1 bacteriocin genes transcriptional regulator BrsR Regulator
  DQM59_RS09935 (NCTC10449_01927) brsM 1940772..1941218 (+) 447 WP_002262388.1 bacteriocin genes regulator BrsM Regulator
  DQM59_RS09940 - 1941209..1941409 (-) 201 Protein_1852 hypothetical protein -
  DQM59_RS09945 (NCTC10449_01928) - 1941550..1941975 (-) 426 WP_002271571.1 hypothetical protein -
  DQM59_RS09950 (NCTC10449_01929) spx 1942226..1942624 (-) 399 WP_002262391.1 transcriptional regulator Spx -
  DQM59_RS09955 (NCTC10449_01930) recA 1942709..1943860 (-) 1152 WP_002262392.1 recombinase RecA Machinery gene
  DQM59_RS09960 (NCTC10449_01931) cinA 1943900..1945156 (-) 1257 WP_002280016.1 competence/damage-inducible protein A Machinery gene
  DQM59_RS09965 (NCTC10449_01932) - 1945305..1945865 (-) 561 WP_002266114.1 DNA-3-methyladenine glycosylase I -

Sequence

Protein


Download         Length: 148 a.a.        Molecular weight: 17106.61 Da        Isoelectric Point: 10.1992

>NTDB_id=1137917 DQM59_RS09935 WP_002262388.1 1940772..1941218(+) (brsM) [Streptococcus mutans strain NCTC10449]
MKILKQIITYSFIGIGIGSLMNYFIAIFFFPNSNPLGVPSFVQLFSSVSQATAVQLFIFALLGVLQGFASSLFKNEKLSL
LTTSLIHYLFIVLPLLLAGSYLHWFYMTRKYFVFSFLLVSIIYILIYLFCYFENKKNIQKINKKLHQI

Nucleotide


Download         Length: 447 bp        

>NTDB_id=1137917 DQM59_RS09935 WP_002262388.1 1940772..1941218(+) (brsM) [Streptococcus mutans strain NCTC10449]
ATGAAAATACTCAAACAGATTATTACTTACAGTTTTATTGGTATAGGAATCGGTTCTTTAATGAATTATTTCATAGCCAT
CTTCTTTTTCCCAAATAGTAATCCACTTGGTGTCCCAAGTTTTGTTCAACTTTTTTCATCAGTTTCACAGGCAACAGCAG
TCCAACTTTTCATTTTTGCTCTTCTAGGCGTTTTACAAGGATTTGCTAGCAGCCTCTTTAAAAATGAAAAACTCAGTCTA
CTAACCACAAGCTTGATTCACTATTTATTCATTGTCCTACCACTTCTCTTAGCCGGATCTTATTTACACTGGTTTTACAT
GACTCGGAAATATTTCGTTTTTTCTTTCCTTTTGGTTTCTATTATTTATATCCTCATTTACTTATTCTGCTATTTTGAAA
ATAAAAAAAACATTCAAAAAATCAATAAGAAGCTGCATCAAATATAA

Domains

Predicted by InterproScan.

Protein of unknown function (DUF3021) (DUF3021)

(5-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsM Streptococcus mutans UA159

100

100

1

Multiple sequence alignment