Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DQM50_RS00795 | Genome accession | NZ_LS483347 |
| Coordinates | 118872..119825 (+) | Length | 317 a.a. |
| NCBI ID | WP_085613996.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain NCTC8324 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 113872..124825
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM50_RS00755 (NCTC8324_00152) | - | 114699..115064 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| DQM50_RS00760 (NCTC8324_00153) | comYA | 115157..116095 (+) | 939 | WP_023079010.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQM50_RS00765 (NCTC8324_00154) | comYB | 116031..117065 (+) | 1035 | WP_011054115.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQM50_RS00770 (NCTC8324_00155) | comYC | 117067..117393 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQM50_RS00775 (NCTC8324_00156) | comGD | 117368..117796 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | - |
| DQM50_RS00780 (NCTC8324_00157) | comGE | 117753..118037 (+) | 285 | WP_032465969.1 | competence type IV pilus minor pilin ComGE | - |
| DQM50_RS00785 (NCTC8324_00158) | comYF | 118030..118464 (+) | 435 | WP_002992738.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQM50_RS00790 (NCTC8324_00159) | comGG | 118448..118774 (+) | 327 | WP_010921801.1 | competence type IV pilus minor pilin ComGG | - |
| DQM50_RS00795 (NCTC8324_00160) | comYH | 118872..119825 (+) | 954 | WP_085613996.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQM50_RS00800 (NCTC8324_00161) | - | 119884..121080 (+) | 1197 | WP_023078999.1 | acetate kinase | - |
| DQM50_RS00805 | - | 121266..121574 (+) | 309 | WP_030126458.1 | hypothetical protein | - |
| DQM50_RS00810 (NCTC8324_00162) | proC | 121657..122427 (-) | 771 | WP_085613997.1 | pyrroline-5-carboxylate reductase | - |
| DQM50_RS00815 (NCTC8324_00163) | pepA | 122474..123541 (-) | 1068 | WP_012560390.1 | glutamyl aminopeptidase | - |
| DQM50_RS00825 (NCTC8324_00164) | - | 124006..124290 (+) | 285 | WP_002992749.1 | DUF4651 domain-containing protein | - |
| DQM50_RS00830 (NCTC8324_00165) | - | 124287..124604 (+) | 318 | WP_111688394.1 | thioredoxin family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36003.05 Da Isoelectric Point: 4.7205
>NTDB_id=1137743 DQM50_RS00795 WP_085613996.1 118872..119825(+) (comYH) [Streptococcus pyogenes strain NCTC8324]
MTFEKTEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVTLITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
MTFEKTEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVTLITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=1137743 DQM50_RS00795 WP_085613996.1 118872..119825(+) (comYH) [Streptococcus pyogenes strain NCTC8324]
ATGACTTTTGAAAAAACTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGACCTTGATTACGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
ATGACTTTTGAAAAAACTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGACCTTGATTACGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
65.506 |
99.685 |
0.653 |
| comYH | Streptococcus mutans UA140 |
65.19 |
99.685 |
0.65 |